LOCUS AK301683 1945 bp mRNA linear HUM 31-JUL-2008
DEFINITION Homo sapiens cDNA FLJ56260 complete cds, highly similar to Ankyrin
repeat and SAM domain-containing protein 3.
ACCESSION AK301683
VERSION AK301683.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1945)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1945
/clone="TESOP2006591"
/clone_lib="TESOP2"
/db_xref="H-InvDB:HIT000496307"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="tumor tissue"
/organism="Homo sapiens"
/tissue_type="esophagus, tumor tissue"
CDS 143..1894
/codon_start=1
/note="highly similar to Ankyrin repeat and SAM
domain-containing protein 3"
/protein_id="BAG63156.1"
/transl_table=1
/translation="MYASYIGHDTIVHLLLEAGVSVNVPTPEGQTPLMLASSCGNESI
AYFLLQQGAELEMKDIQGWTALFHCTSAGHQHMVRFLLDSGANANVREPICGFTPLME
AAAAGHEIIVQYFLNHGVKVDARDHSGATARMLAKQYGHMKIVALMDTYSPSLPKSLY
RSPEKYEDLSSSDESCPAPQRQRPCRKKGVSIHEGPRALARITGIGLGGRAPRPRYEQ
APPRGYVTFNSSGENPLEEEGLCCRDVTSPINERDVESSSSSSSREEHAFCANLGPVQ
SSSSSEGLARAQGLSSEASVESNEDSDHACKSSARKQAKSYMKTKNPDSQWPPRTATD
REGFLAESSPQTQRAPYSGPQDLAALLEQIGCLKYLQVFEEQDVDLRIFLTLTESDLK
EIGITLSGPKRKMTSAIARWHSSARPPGDALELAYADRLEAEMQELAIQLHKRCEEVE
ATRGQVCQEQELRAVVESCLLEQDRAREDLQARLRETWALARDAALVLDQLRACQAEL
SSRVRQDQPPGAATLGLAVPPADSKGWQASLQAMSLPELSGALEDRVREMGQALCLVT
QSLEKLQVLNGKKWRET"
BASE COUNT 409 a 577 c 637 g 322 t
ORIGIN
1 gcggtgcccc ggcgagggag cgtggcggcg agctgtttgg gggggttggc gacggcagcc
61 cgagggcggc gcaaggcctg aggcccagca caggagagag ttagatttga ataagaagaa
121 tggtggtggc tggaccccgc tgatgtatgc ctcctacatt ggccacgaca caatcgtgca
181 cctgctgctt gaggcggggg tgagtgtgaa tgtgccgacc ccagaagggc agactccact
241 gatgctggcc tccagctgtg gcaacgagag catcgcctac tttcttctcc agcaaggtgc
301 agagctagaa atgaaagaca tccagggctg gacagccctc ttccactgta ccagcgccgg
361 gcaccagcac atggtcaggt tcctcttgga cagtggagcc aatgccaacg tgagggagcc
421 gatatgtgga tttactccct tgatggaagc agctgctgct ggccatgaga taatcgtgca
481 gtattttctg aatcacggag tcaaggtgga cgcgagagac cacagtggag ccacagcccg
541 gatgctggcc aagcagtacg gacacatgaa gatcgtggcc ttgatggaca cttactcgcc
601 ctctctgccc aagagcctct atcggagccc agaaaagtac gaagatctga gctcttctga
661 cgagtcctgc cctgctcctc agagacagag gccttgccgg aagaagggtg tcagcatcca
721 cgagggaccg cgagccctgg ccaggatcac aggcattggc ctgggcggca gagccccacg
781 gcctcgctat gagcaggctc ctccccgtgg ctatgtcacc ttcaacagca gtggcgagaa
841 ccccctggaa gaagagggcc tctgctgccg ggatgtcacc tcccccatca atgagcggga
901 cgtggagagc agcagcagca gcagcagtcg ggaggaacat gctttctgtg ccaacctggg
961 gcccgtccag agcagcagca gcagcgaggg cctggccaga gcccaggggc tcagcagcga
1021 agcttctgtg gagagcaacg aggactcgga tcatgcctgt aaaagctcag ctcgcaaaca
1081 agctaaaagt tacatgaaga ccaagaatcc tgacagccag tggcctcccc gcactgcaac
1141 tgacagggaa ggctttctcg ctgagtccag cccccagact cagagggccc cctactcagg
1201 accccaggac cttgccgcac tgctggagca gatcgggtgt ctgaagtacc tgcaggtgtt
1261 tgaggagcag gacgtggacc tccgcatctt tctgaccctc actgagagcg acctgaagga
1321 aattggcatc acgctgtctg ggcccaagag gaagatgacg tccgccattg cccgctggca
1381 cagcagtgcc cgcccacccg gggatgccct ggagctggcc tacgccgacc ggctggaggc
1441 tgagatgcaa gagctcgcca tccagctgca caagcgctgc gaggaggtag aggccacgcg
1501 gggccaggtg tgtcaggagc aggagctgcg cgccgtggtg gagagctgcc tgctggagca
1561 ggaccgcgcc cgcgaggacc tccaggcccg gctgcgggag acgtgggccc tggcccggga
1621 tgctgccctc gtcctggacc agctgcgagc ctgtcaagct gagctgtcat ctcgagtgag
1681 gcaggaccag ccccctggtg cagccactct gggcctagcc gtccccccag ctgactccaa
1741 gggctggcaa gcgtccctgc aggccatgag cctccccgag ctctcgggag ccctggagga
1801 ccgtgtccgt gagatggggc aagcactgtg cttagtgacc cagagcctgg agaagctgca
1861 ggtgctgaac gggaagaagt ggcgggagac ctagcctgcg ggccgaatct gacgttgggt
1921 gattggtcca ccctgaagct gtgtg
//