LOCUS AK301679 1016 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ56791 complete cds, highly similar to
Keratin, type I cytoskeletal 16.
ACCESSION AK301679
VERSION AK301679.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1016)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1016
/clone="TESOP2006133"
/clone_lib="TESOP2"
/db_xref="H-InvDB:HIT000496303"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="tumor tissue"
/organism="Homo sapiens"
/tissue_type="esophagus, tumor tissue"
CDS 440..847
/codon_start=1
/note="highly similar to Keratin, type I cytoskeletal 16"
/protein_id="BAG63152.1"
/transl_table=1
/translation="MQHLGDRLASYLDKVRALEEANADLEVKIRDWYQRQRPSEIKDY
SPYFKTIEDLRHKIIAATIENAQPILQIDNARLAADDFRTNYEHELALQQTVEAGVNG
LCRVLDELTLARTDLEMQIEGLKEELAYLRKNH"
BASE COUNT 194 a 279 c 337 g 206 t
ORIGIN
1 agcatgctct tagccttcct gagcaccttc ccttttttca gccaactgct cgctcgctca
61 cctccctcct tggcacgatg agcacctgca gccaccagtt cacctcctcc agatccatga
121 agggctcctg cagcatcggg ggcagcatcg ggggcggctc cagccgcatt tcctctgtcc
181 tggctggagg gtcctgccat gcccccagca cctacggggg ggcctgtgtg tctccttctc
241 tcgcttctcc tttgggggag cctgcgggct ggggggcggc tatggcggtg gcttcggcag
301 cagcagcagc tttgctagtg gctttggggg aggatatggt ggtggccttg gtgctggctt
361 cggtggtggc ttgggtgctg gcttgggtgg tggctttgct ggtggtgatg ggcttctggt
421 gggcagtgag aaggtgacca tgcagcacct cggtgaccgc ctggcctcct acctggacaa
481 ggtgcgtgct ctggaggagg ccaacgccga cctggaagtg aagatccgtg actggtacca
541 gaggcagcgg cccagtgaga tcaaagacta cagtccctac ttcaagacca tcgaggacct
601 gaggcacaag atcattgcgg ccaccattga gaatgcgcag cccattttgc agattgacaa
661 tgccaggctg gcagctgatg acttcaggac caattacgag cacgagctgg ccctgcagca
721 gactgtggag gctggcgtca atggcctgtg ccgggtgttg gacgagctga ccctggccag
781 gactgacctg gagatgcaga tagaaggcct gaaggaggag ctggcctacc tgaggaagaa
841 ccactaggag gagatgcttg ctctgcgagg tcagaccggt ggagaagtga acgtggagac
901 ggatgccgca cctggcgtgg acctgagctg catcctgaat gagatgcgca accagtacga
961 gcagatggca aagcacaacc acagagatgc tgggcctggt tcctgagcaa gaccaa
//