LOCUS AK301677 1479 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ55175 complete cds.
ACCESSION AK301677
VERSION AK301677.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1479)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1479
/clone="TESOP2005873"
/clone_lib="TESOP2"
/db_xref="H-InvDB:HIT000496301"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="tumor tissue"
/organism="Homo sapiens"
/tissue_type="esophagus, tumor tissue"
CDS 4..1266
/codon_start=1
/protein_id="BAG63150.1"
/transl_table=1
/translation="MCVPRGMQEPLGYSQSSLARACLLVQDACGMFGEVHLEFTMSKA
RQLEGKSCSLVGMKVLQKVTRGRTAGIFSLIDTLWPPAIPLKTPGRDQPCEEIKTHLP
PPALCYILTAHPNLGQIDIIDEDPIYKLYQPPVTRCLRDILQMNDLGTRCSFYATVIY
QKPQLKSLLLLEQREIWLLVTDVTLQTKEERDPRLPKTLLVYVAPLCVLGSEVLEALA
GAAPHSLFFKDALRDQGRIVCAERTVLLLQKPLLSVVSGASSCELPGPVMLDSLDSAT
PVNSICSVQGTVVGVDESTAFSWPVCDMCGNGRLEQRPEDRGAFSCGDCSRVVTSPVL
KRHLQVFLDCRSRPQCRVKVKLLQRSISSLLRFAAGEDGSYEVKSVLGKEVGLLNCFV
QSVTAHPTSCIGLEEIELLSAGGASAEH"
BASE COUNT 332 a 357 c 412 g 378 t
ORIGIN
1 accatgtgtg taccaagagg catgcaggag ccattgggat actcccaaag ttctctggcc
61 agagcctgcc ttctggtaca agatgcctgt ggaatgttcg gtgaagtgca cttggagttc
121 accatgtcga aggcaagaca gttggaaggg aagtcttgca gcctggtggg aatgaaggtt
181 ctacagaaag tcaccagagg aaggacagcg gggattttca gtttgattga caccctgtgg
241 cccccagcga tacctctgaa aacacctggc cgcgaccagc cctgtgaaga gataaaaact
301 catctgcctc ctccagcctt gtgttacatc ctcacagctc atccaaatct gggacaaatt
361 gatataattg acgaagaccc catttataag ctttaccagc ctccagttac ccgctgctta
421 agagacattc tccagatgaa tgatcttggt acccgttgca gtttctatgc cacggtgatt
481 taccaaaaac cacagctgaa gagtctgctg cttctggagc aaagggagat ctggctgcta
541 gtgaccgatg tcactctgca aacgaaggag gagagagacc ccaggctccc caaaaccctg
601 ctggtctatg tggccccctt gtgtgtgctg ggctctgaag tcctggaggc actcgctggg
661 gctgcccctc acagcctctt cttcaaggac gctctccgtg accagggtcg gattgtttgt
721 gctgaacgaa ctgtcctctt gcttcagaag ccccttttga gtgtggtctc tggtgcaagt
781 tcctgtgagc tgcctggccc ggtgatgctc gacagcctgg actctgcaac acctgtcaac
841 tccatctgca gtgttcaagg cactgtggtt ggcgtggacg agagcactgc tttctcatgg
901 cctgtgtgtg acatgtgtgg caacgggaga ttggaacaga ggccggaaga cagaggcgcc
961 ttttcctgtg gggactgctc ccgggtggtc acatctcctg ttctcaagag gcacctgcag
1021 gtcttcctgg actgccgctc aagaccgcag tgcagagtga aggtcaagct gttgcagcgc
1081 agcatttcct ccctgctgag gtttgccgcc ggtgaagatg ggagctacga agtgaagagt
1141 gtcctcggaa aggaagtggg gttgttaaat tgttttgtcc agtccgtaac cgcccacccg
1201 accagctgca ttggattgga ggaaatcgag cttctgagtg caggaggggc ctctgcagaa
1261 cactagcggt tgccgcagga tctgtgaact ttgcaatgtg gctgcaaggg tggtggtggt
1321 ggtggtgatt tggggtagtt atttgttaac tatggacaca gtgaacgtag tttacgatct
1381 tgaaatgaaa cttagatttt tctggggaaa tgttcagata cagttttgtg aactgtaaat
1441 caaaatacct ttttctacag tttatctttt attttctgc
//