LOCUS AK301670 1016 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ52287 complete cds, highly similar to
Splicing factor arginine/serine-rich 11.
ACCESSION AK301670
VERSION AK301670.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1016)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1016
/clone="TESOP2005265"
/clone_lib="TESOP2"
/db_xref="H-InvDB:HIT000496294"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="tumor tissue"
/organism="Homo sapiens"
/tissue_type="esophagus, tumor tissue"
CDS 176..562
/codon_start=1
/note="highly similar to Splicing factor
arginine/serine-rich 11"
/protein_id="BAG63143.1"
/transl_table=1
/translation="MSNTTVVPSTAGPGPSGGPGGGGGGGGGGGGTEVIQVTNVSPSA
SSEQMRTLFGFLGKIDELRLFPPDDSPLPVSSRVCFVKFHDPDSAVVAQHLTNTVFVD
RALIVVPYAEVKQPTRVVVHKTAFES"
BASE COUNT 216 a 271 c 277 g 252 t
ORIGIN
1 ggcgtgcggc ggggcggaga aacggcggcg gcggcggcgg catcggcagc agtagcagag
61 gctgtagcat cggacaccct cctctctccc gcaatccggt tcctcttccc cctccttctc
121 actgtttgtt gtgtgtttga tgtgttaaag caggagcgag aacccgagca gcgccatgag
181 caacactacc gtcgtcccca gcactgcagg tccgggcccc agcggcgggc ccggtggcgg
241 aggtggtggt ggcggcggag gcggcggcac cgaggtaatc caggtgacta atgtctcccc
301 gagcgctagc tctgagcaga tgcggactct cttcggtttc ctaggcaaga tcgacgaact
361 gcgcctcttc ccgccggatg attcgccttt gccagtctca tctcgtgtct gctttgttaa
421 gttccatgat ccagactcag cagttgtggc acagcatctg acaaacactg tattcgttga
481 cagagctttg atagtcgtac catatgcaga agtgaagcag ccgacacgag tcgttgttca
541 taagacagct tttgaaagtt gagagcacac ccctggagaa ccgactgtgc ttgcttacgt
601 ttggttcatg acttaaaaat cgagtacagg agttattcct gatgaagcta aagctttgtc
661 tctgttggca ccagctaatg cagtggcagg tcttctgcct ggtggtggac tcctgcctac
721 tcctaaccca cttacccaga ttggcgctgt tccactggct gctttggggg ctcctactct
781 tgatcctgcc cttgctgcac ttgggcttcc tggagcaaac ttgaactctc agtctcttgc
841 tgcagatcag ttgctgaagc ttatgagtac tgttgatccc aagttgaatc atgtagctgc
901 tggtctcgtt tcaccaagtc tgaaatcgga tacctctagt aaagaaatag aggaagctat
961 gaaaagagta cgagaagcac agtccctaat ttctgctgct atagaaccag ataaga
//