LOCUS AK301640 1748 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ56947 complete cds, highly similar to Homo
sapiens Rhesus blood group, C glycoprotein (RHCG), mRNA.
ACCESSION AK301640
VERSION AK301640.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1748)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1748
/clone="TESOP2000659"
/clone_lib="TESOP2"
/db_xref="H-InvDB:HIT000496264"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="tumor tissue"
/organism="Homo sapiens"
/tissue_type="esophagus, tumor tissue"
CDS 40..1377
/codon_start=1
/note="highly similar to Homo sapiens Rhesus blood group,
C glycoprotein (RHCG), mRNA"
/protein_id="BAG63121.1"
/transl_table=1
/translation="MAWNTNLRWRLPLTCLLLQVIMVILFGVFVRYDFEADAHWWSER
THKNLSDMENEFYYRYPSFQDVHVMVFVGFGFLMTFLQRYGFSAVGFNFLLAAFGIQW
ALLMQGWFHFLQDRYIVVGVENLINADFCVASVCVAFGAVLGKVSPIQLLIMTFFQVT
LFAVNEFILLNLLKVKDAGGSMTIHTFGAYFGLTVTRILYRCNLEQSKERQNSVYQSD
LFAMIGTLFLWMYWPSFNSAISYHGDSQHRAAINTYCSLAACVLTSVAISSALHKKGK
LDMVHIQNATLAGGVAVGTAAEMMLMPYGALIIGFVCGIISTLGFVYLTPFLESRLHI
QDTCGINNLHGIPGIIGGIVGAVTAASASLEVYGKEGLVHSFDFQGFNGDWTARTQGK
FQIYGLLVTLAMALMGGIIVGLILRLPFWGQPSDENCFEDAVYWEDLELAPNQ"
BASE COUNT 374 a 489 c 470 g 415 t
ORIGIN
1 gaaccgcccg ctgccagccc ggccaggcac ccctgcagca tggcctggaa caccaacctc
61 cgctggcggc tgccgctcac ctgcctgctc ctgcaggtga ttatggtgat tctcttcggg
121 gtgttcgtgc gctacgactt cgaggccgac gcccactggt ggtcagagag gacgcacaag
181 aacttgagcg acatggagaa cgaattctac tatcgctacc caagcttcca ggacgtgcac
241 gtgatggtct tcgtgggctt cggcttcctc atgactttcc tgcagcgcta cggcttcagc
301 gccgtgggct tcaacttcct gttggcagcc ttcggcatcc agtgggcgct gctcatgcag
361 ggctggttcc acttcttaca agaccgctac atcgtcgtgg gcgtggagaa cctcatcaac
421 gctgacttct gcgtggcctc tgtctgcgtg gcctttgggg cagttctggg taaagtcagc
481 cccattcagc tgctcatcat gactttcttc caagtgaccc tcttcgctgt gaatgagttc
541 attctcctta acctgctaaa ggtgaaggat gcaggaggct ccatgaccat ccacacattt
601 ggcgcctact ttgggctcac agtgacccgg atcctctacc gatgcaacct agagcagagc
661 aaggagagac agaattctgt gtaccagtcg gacctctttg ccatgattgg caccctcttc
721 ctgtggatgt actggcccag cttcaactca gccatatcct accatgggga cagccagcac
781 cgagccgcca tcaacaccta ctgctccttg gcagcctgcg tgcttacctc ggtggcaata
841 tccagtgccc tgcacaagaa gggcaagctg gacatggtgc acatccagaa tgccacgctc
901 gcaggagggg tggccgtggg taccgctgct gagatgatgc tcatgcctta cggtgccctc
961 atcatcggct tcgtctgcgg catcatctcc accctgggtt ttgtatacct gaccccattc
1021 ctggagtccc ggctgcacat ccaggacaca tgtggcatta acaatctgca tggcattcct
1081 ggcatcatag gcggcatcgt gggtgctgtg acagcggcct ccgccagcct tgaagtctat
1141 ggaaaagaag ggcttgtcca ttcctttgac tttcaaggtt tcaacgggga ctggaccgca
1201 agaacacagg gaaagttcca gatttatggt ctcttggtga ccctggccat ggccctgatg
1261 ggtggcatca ttgtggggct cattttgaga ttaccattct ggggacaacc ttcagatgag
1321 aactgctttg aggatgcggt ctactgggag gacctggaac ttgctcctaa tcaatagaat
1381 acagcaaagg catgggatgc aggtgattct gtgtacatgg ttacgtaact aaatagataa
1441 gattgtagca cctgtcttgc tggagtgttt cacactcttg ctggctttga tgaagcaggt
1501 ggccatttga ggcccaactg agagtggcct gtaaaactga gggcagctga cagccagcaa
1561 gaaaatgagc cttcagtcct gtaaatgcaa ggaactgaat tgtgccaaga gctgcatgag
1621 cttggaagca gatccttcct cagtcaagct tccagatgag gacccagtcc tgacccatac
1681 tttgattgca ggcttgcaga gggcccagct cagccattcc aagattcttg acccacagaa
1741 gctgagag
//