LOCUS AK301617 1451 bp mRNA linear HUM 24-JUL-2008 DEFINITION Homo sapiens cDNA FLJ53107 complete cds, highly similar to Squalene synthetase (EC 2.5.1.21). ACCESSION AK301617 VERSION AK301617.1 KEYWORDS FLI_CDNA; oligo capping. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1451) AUTHORS Isogai,T. and Yamamoto,J. TITLE Direct Submission JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases. Contact:Takao Isogai Reverse Proteomics Research Institute; 1-9-11 Kaji-cho, Chiyoda-ku, Tokyo 101-0044, Japan E-mail :flj-cdna@nifty.com REFERENCE 2 AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K., Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y., Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M., Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T. TITLE NEDO human cDNA sequencing project focused on splicing variants JOURNAL Unpublished (2007) COMMENT Human cDNA sequencing project focused on splicing variants of mRNA in NEDO functional analysis of protein and research application project supported by Ministry of Economy, Trade and Industry, Japan; cDNA selection for complete cds sequencing: Reverse Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan (Hitachi) and Japan Biological Informatics Consortium, Japan (JBIC); cDNA complete cds sequencing: JBIC; cDNA library construction: Helix Research Institute supported by Japan Key Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing: Research Association for Biotechnology, Japan, Biotechnology Center, National Institute of Technology and Evaluation, Japan and HRI; cDNA mapping to human genome: Central Research Laboratory, Hitachi; evaluation and annotation: REPRORI. FEATURES Location/Qualifiers source 1..1451 /clone="TCOLN2000506" /clone_lib="TCOLN2" /db_xref="H-InvDB:HIT000496241" /db_xref="taxon:9606" /mol_type="mRNA" /note="cloning vector: pME18SFL3" /note="tumor tissue" /organism="Homo sapiens" /tissue_type="colon, tumor tissue" CDS 98..850 /codon_start=1 /note="highly similar to Squalene synthetase (EC 2.5.1.21)" /protein_id="BAG63102.1" /transl_table=1 /translation="MPWPPRRVLQPGALPDRGQAEASEFEDPLVGEDTERANSMGLFL QKTNIIRDYLEDQQGGREFWPQEVWSRYVKKLGDFAKPENIDLAVQCLNELITNALHH IPDVITYLSRLRNQSVFNFCAIPQVMAIATLAACYNNQQVFKGAVKIRKGQAVTLMMD ATNMPAVKAIIYQYMEEIYHRIPDSDPSSSKTRQIISTIRTQNLPNCQLISRSHYSPI YLSFVMLLAALSWQYLTTLSQVTEDYVQTGEH" BASE COUNT 386 a 323 c 346 g 396 t ORIGIN 1 actccacagg tccagccggc cggtgagcgc ctggggaccg cagaggtgag agtcgcgccc 61 gggagtccgc cgcctgcgcc aggatggagt tcgtgaaatg ccttggccac cccgaagagt 121 tctacaacct ggtgcgcttc cggatcgggg gcaagcggaa gcctcagagt ttgaagaccc 181 cttagttggt gaagatacag aacgtgccaa ctctatgggc ctgtttctgc agaaaacaaa 241 catcatccgt gactatctgg aagaccagca aggaggaaga gagttctggc ctcaagaggt 301 ttggagcagg tatgttaaga agttagggga ttttgctaag ccggagaata ttgacttggc 361 cgtgcagtgc ctgaatgaac ttataaccaa tgcactgcac cacatcccag atgtcatcac 421 ctacctttcg agactcagaa accagagtgt gtttaacttc tgtgctattc cacaggtgat 481 ggccattgcc actttggctg cctgttataa taaccagcag gtgttcaaag gggcagtgaa 541 gattcggaaa gggcaagcag tgaccctgat gatggatgcc accaatatgc cagctgtcaa 601 agccatcata tatcagtata tggaagagat ttatcataga atccccgact cagacccatc 661 ttctagcaaa acaaggcaga tcatctccac catccggacg cagaatcttc ccaactgtca 721 gctgatttcc cgaagccact actcccccat ctacctgtcg tttgtcatgc ttttggctgc 781 cctgagctgg cagtacctga ccactctctc ccaggtaaca gaagactatg ttcagactgg 841 agaacactga tcccaaattt gtccatagct gaagtccacc ataaagtgga tttacttttt 901 ttctttaagg atggatgttg tgttctcttt atttttttcc tactacttta atccctaaaa 961 gaacgctgtg tggctgggac ctttaggaaa gtgaaatgca ggtgagaaga acctaaacat 1021 gaaaggaaag ggtgcctcat cccagcaacc tgtccttgtg ggtgatgatc actgtgctgc 1081 ttgcggctca tggcagagca ttcagtgcca cggtttaggt gaagtcgctg catatgtgac 1141 tgtcatgaga tcctacttag tatgatcctg gctagaatga taattaaaag tatttaattt 1201 gaagcaccat ttgaatgttc gtaatagtag aaaatgatgt gaattttctt tctgttcggc 1261 tcctattttt ctcatcattt tgttttcttt aattgggttg aatggagtag atagaaatat 1321 ttatggttta ggtaacagtt agatgtttcc taagaatgca aactgccttt tccacacaaa 1381 ggctgggaat aaaattctgg gtattctcgt attctcattt aaaggagttt agctttcaga 1441 gagaaacagc a //