LOCUS AK301611 1128 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ51352 complete cds, highly similar to
Hepatocyte nuclear factor 3-beta.
ACCESSION AK301611
VERSION AK301611.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1128)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1128
/clone="TCERX2002452"
/clone_lib="TCERX2"
/db_xref="H-InvDB:HIT000496235"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="tumor tissue"
/organism="Homo sapiens"
/tissue_type="cervix, tumor tissue"
CDS 4..1035
/codon_start=1
/note="highly similar to Hepatocyte nuclear factor 3-beta"
/protein_id="BAG63097.1"
/transl_table=1
/translation="MLGAVKMEGHEPSDWSSYYAEPEGYSSVSRARDPKTYRRSYTHA
KPPYSYISLITMAIQQRPNKMLTLSEIYQWIMDLFPFYRQNQQRWQNSIRHSLSFNDC
FLKVPRSPDKPGKGSFWTLHPDSGNMFENGCYLRRQKRFKCEKQLALKEAAGAAGSGK
KAAAGAQASQAQLGEAAGPASETPAGTESPHSSASPCQEHKRGGLGELKGTPAAALSP
PEPAPSPGQQQQAAAHLLGPPHHPGLPPEAHLKPEHHYAFNHPFSINNLMSSEQQHHH
SHHHHQPHKMDLKAYEQVMHYPGYGSPMPGSLAMGPVTNKTGLDASPLAADTSYYQGV
YSRPIMNSS"
BASE COUNT 232 a 419 c 328 g 149 t
ORIGIN
1 agtatgctgg gagcggtgaa gatggaaggg cacgagccgt ccgactggag cagctactat
61 gcagagcccg agggctactc ctccgtgagc cgcgcccgcg accccaagac ctacaggcgc
121 agctacacgc acgcaaagcc gccctactcg tacatctcgc tcatcaccat ggccatccag
181 cagcgcccca acaagatgct gacgctgagc gagatctacc agtggatcat ggacctcttc
241 cccttctacc ggcagaacca gcagcgctgg cagaactcca tccgccactc gctctccttc
301 aacgactgtt tcctgaaggt gccccgctcg cccgacaagc ccggcaaggg ctccttctgg
361 accctgcacc ctgactcggg caacatgttc gagaacggct gctacctgcg ccgccagaag
421 cgcttcaagt gcgagaagca gctggcgctg aaggaggccg caggcgccgc cggcagcggc
481 aagaaggcgg ccgccggagc ccaggcctca caggctcaac tcggggaggc cgccgggccg
541 gcctccgaga ctccggcggg caccgagtcg cctcactcga gcgcctcccc gtgccaggag
601 cacaagcgag ggggcctggg agagctgaag gggacgccgg ctgcggcgct gagcccccca
661 gagccggcgc cctctcccgg gcagcagcag caggccgcgg cccacctgct gggcccgccc
721 caccacccgg gcctgccgcc tgaggcccac ctgaagccgg aacaccacta cgccttcaac
781 cacccgttct ccatcaacaa cctcatgtcc tcggagcagc agcaccacca cagccaccac
841 caccaccaac cccacaaaat ggacctcaag gcctacgaac aggtgatgca ctaccccggc
901 tacggttccc ccatgcctgg cagcttggcc atgggcccgg tcacgaacaa aacgggcctg
961 gacgcctcgc ccctggccgc agatacctcc tactaccagg gggtgtactc ccggcccatt
1021 atgaactcct cttaagaaga cgacggcttc aggcccggct aactctggca ccccggatcg
1081 aggacaagtg agagagcaag tgggggtcga gactttgggg agacggtg
//