LOCUS AK301598 2626 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ56163 complete cds, moderately similar to Mus
musculus sushi, von Willebrand factor type A, EGF and pentraxin
domain containing 1, mRNA.
ACCESSION AK301598
VERSION AK301598.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2626)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..2626
/clone="TBAES2008117"
/clone_lib="TBAES2"
/db_xref="H-InvDB:HIT000496222"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="tumor tissue"
/organism="Homo sapiens"
/tissue_type="breast, tumor tissue"
CDS 97..2478
/codon_start=1
/note="moderately similar to Mus musculus sushi, von
Willebrand factor type A, EGF and pentraxin domain
containing 1, mRNA"
/protein_id="BAG63086.1"
/transl_table=1
/translation="MKTTEKGWEFHSVELNRGNNVLYWRTTAFSVWTKVPKPVLVRNI
AITGVAYTSECFPCKPGTYADKQGSSFCKLCPANSYSNKGETSCRQCDPDKYSEKGSS
SCNVRPACTDKDYFYTHTACDANGETQLMYKWAKPKICSEDLEGAVKLPASGVKTHCP
PCNPGFFKTNNSTCQPCPYGSYSNGSDCTRCPAGTEPAVGFEYKWWNTLPTNMETTVL
SGINFEYKGMTGWEVAGDHIYTAAGASDNDFMILTLVVPGFRPPQSVMADTENKEVAR
ITFVFETLCSVNCELYFMVGVNSRTNTPVETWKGSKGKQSYTYIIEENTTTSFTWAFQ
RTTFHEASRKYTNDVAKIYSINVTNVMNGVASYCRPCALEASDVGSSCTSCPAGYYID
RDSGTCHSCPTNTILKAHQPYGVQACVPCGPGTKNNKIHSLCYNDCTFSRNTPTRTFN
YNFSALANTVTLAGGPSFTSKGLKYFHHFTLSLCGNQGRKMSVCTDNVTDLRIPEGES
GFSKSITAYVCQAVIIPPEVTGYKAGVSSQPVSLADRLIGVTTDMTLDGITSPAELFH
LESLGIPDVIFFYRSNDVTQSCSSGRSTTIRVRCSPQKTVPGSLLLPGTCSDGTCDGC
NFHFLWESAAACPLCSVADYHAIVSSCVAGIQKTTYVWREPKLCSGGISLPEQRVTIC
KTIDFWLKVGISAGTCTAILLTVLTCYFWKKNQKLEYKYSKLVMNATLKDCDLPAADS
CAIMEGEDVEDDLIFTSKKSLFGKIKSFTSKRTPDGFDSVPLKTSSGGLDMDL"
BASE COUNT 655 a 730 c 620 g 621 t
ORIGIN
1 gttaacttcg aatactacta tccagactcc agcatcatct ttgagttttt cgttcagaat
61 gaccagtgcc agcccaatgc agatgactcc aggtggatga agaccacaga gaaaggatgg
121 gaattccaca gtgtggagct aaatcgaggc aataatgtcc tctattggag aaccacagcc
181 ttctcagtat ggaccaaagt acccaagcct gtgctggtga gaaacattgc cataacaggg
241 gtggcctaca cttcagaatg cttcccctgc aaacctggca cgtatgcaga caagcagggc
301 tcctctttct gcaaactttg cccagccaac tcttattcaa ataaaggaga aacttcttgc
361 cgccagtgtg accctgacaa atactcagag aaaggatctt cttcctgtaa cgtgcgccca
421 gcttgcacag acaaagatta tttctacaca cacacggcct gcgatgccaa cggagagaca
481 caactcatgt acaaatgggc caagccgaaa atctgtagcg aggaccttga gggggcagtg
541 aagctgcctg cctctggtgt gaagacccac tgcccaccct gcaacccagg cttcttcaaa
601 accaacaaca gcacctgcca gccctgccca tatggttcct actccaatgg ctcagactgt
661 acccgctgcc ctgcagggac tgaacctgct gtgggatttg aatacaaatg gtggaacacg
721 ctgcccacaa acatggaaac gaccgttctc agtgggatca acttcgagta caagggcatg
781 acaggctggg aggtggctgg tgatcacatt tacacagctg ctggagcctc agacaatgac
841 ttcatgattc tcactctggt tgtgccagga tttagacctc cgcagtcggt gatggcagac
901 acagagaata aagaggtggc cagaatcaca tttgtctttg agaccctctg ttctgtgaac
961 tgtgagctct acttcatggt gggtgtgaat tctaggacca acactcctgt ggagacgtgg
1021 aaaggttcca aaggcaaaca gtcctatacc tacatcattg aggagaacac taccacgagc
1081 ttcacctggg ccttccagag gaccactttt catgaggcaa gcaggaagta caccaatgac
1141 gttgccaaga tctactccat caatgtcacc aatgttatga atggtgtggc ctcctactgc
1201 cgtccctgtg ccctagaagc ctctgatgtg ggctcctcct gcacctcttg tcctgctggt
1261 tactatattg accgagattc aggaacctgc cactcctgcc ccactaacac aattctgaaa
1321 gcccaccagc cttatggtgt ccaggcctgt gtgccctgtg gtccagggac caagaacaac
1381 aagatccact ctctgtgcta caacgattgc accttctcac gcaacactcc gaccaggact
1441 ttcaactaca acttctccgc tttggcaaac actgtcactc ttgctggagg gccaagcttc
1501 acttccaaag ggctgaaata cttccatcac tttaccctca gtctctgtgg aaaccagggt
1561 aggaaaatgt ctgtgtgcac cgacaatgtc actgacctcc ggattcctga gggtgagtca
1621 gggttctcca aatctatcac agcctacgtc tgccaggcag tcatcatccc cccagaggtg
1681 acaggctaca aggccggggt ttcctcacag cctgtcagcc ttgctgatcg acttattggg
1741 gtgacaacag atatgactct ggatggaatc acctccccag ctgaactttt ccacctggag
1801 tccttgggaa taccggacgt gatcttcttt tataggtcca atgatgtgac ccagtcctgc
1861 agttctggga gatcaaccac catccgcgtc aggtgcagtc cacagaaaac tgtccctgga
1921 agtttgctgc tgccaggaac gtgctcggat gggacctgtg atggctgcaa cttccacttc
1981 ctgtgggaga gcgcggctgc ttgcccgctc tgctcagtgg ctgactacca tgctatcgtc
2041 agcagctgtg tggctgggat ccagaagact acttacgtgt ggcgagaacc caagctatgc
2101 tctggtggca tttctctgcc tgagcagaga gtcaccatct gcaaaaccat agatttctgg
2161 ctgaaagtgg gcatctctgc aggcacctgt actgccatcc tgctcaccgt cttgacctgc
2221 tacttttgga aaaagaatca aaaactagag tacaagtact ccaagctggt gatgaatgct
2281 actctcaagg actgtgacct gccagcagct gacagctgcg ccatcatgga aggcgaggat
2341 gtagaggacg acctcatctt taccagcaag aagtcactct ttgggaagat caaatcattt
2401 acctccaaga ggactcctga tggatttgac tcagtgccgc tgaagacatc ctcaggaggc
2461 ctagacatgg acctgtgaga ggcactgcct gcctcacctg cctcctcacc ttgcatagca
2521 cctttgcaag cctgcggcga tttgggtgcc agcatcctgc aacacccact gctggaaatc
2581 tcttcattgt ggccttatca gatgtttgaa tttcagatct tttttt
//