LOCUS AK301555 1772 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ50898 complete cds, highly similar to
DNA-(apurinic or apyrimidinic site) lyase 2(EC 4.2.99.18).
ACCESSION AK301555
VERSION AK301555.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1772)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1772
/clone="TBAES2002106"
/clone_lib="TBAES2"
/db_xref="H-InvDB:HIT000496179"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="tumor tissue"
/organism="Homo sapiens"
/tissue_type="breast, tumor tissue"
CDS 388..1431
/codon_start=1
/note="highly similar to DNA-(apurinic or apyrimidinic
site) lyase 2(EC 4.2.99.18)"
/protein_id="BAG63051.1"
/transl_table=1
/translation="MRFYRLLQIRTEALLAAGSHVIILGDLNTAHRPIDHWDAVNLEC
FEEDPGRKWMDSLLSNLGCQSASHVGPFIDSYRCFQPKQEGAFTCWSAVTGARHLNYG
SRLDYVLGDRTLVIDTFQASFLLPEVMGSDHCPVGAVLSVSSVPAKQCPPLCTRFLPE
FAGTQLKILRFLVPLEQSPVLEQSTLQHNNQTRVQTCQNKAQVRSTRPQPSQVGSSRG
QKNLKSYFQPSPSCPQASPDIELPSLPLMSALMTPKTPEEKAVAKVVKGQAKTSEAKD
EKELRTSFWKSVLAGPLRTPLCGGHREPCVMRTVKKPGPNLGRRFYMCARPRGPPTDP
SSRCNFFLWSRPS"
BASE COUNT 363 a 536 c 466 g 407 t
ORIGIN
1 gcagttcgct cgcgcctagg ttggcgcggg ctgggaggtg ttccagccct ttaagatgtt
61 gcgcgtggtg agctggaaca tcaatgggat tcggagaccc ctgcaagggg tggcaaatca
121 ggaacccagc aactgtgccg ccgtggccgt ggggcgcatt ttggacgagc tggatgcgga
181 tatcgtctgt ctccaggaaa ccaaagtgac cagggatgca ctgacagagt ccctggctat
241 cgttgagggt tataactcct atttcagctt cagccgcaac cgtagcggct attctgcaca
301 tgggaaggta aggagaagac cttgacccta atcaacgtgt actgccccca tgcggaccct
361 gggaggcctg agcggctagt ctttaagatg cgcttctatc gtttgctgca aatccgaaca
421 gaagccctcc tggcggcagg cagccatgtg atcattctgg gtgacctgaa tacagcccac
481 cgccccattg accactggga tgcagtcaac ctggaatgct ttgaagagga cccagggcgc
541 aagtggatgg acagcttgct cagtaacttg gggtgccagt ctgcctctca tgtagggccc
601 ttcatcgata gctaccgctg cttccaacca aagcaggagg gggccttcac ctgctggtca
661 gcagtcactg gcgcccgcca tctcaactat ggctcccggc ttgactatgt gctgggggac
721 aggaccctgg tcatagacac ctttcaggcc tctttcctgc tgcctgaggt gatgggctct
781 gaccactgcc ctgtgggtgc agtcttgagt gtgtcctctg tgcctgcaaa acagtgccca
841 cctctgtgca cccgcttcct ccctgagttt gcaggcaccc agctcaagat ccttcgcttc
901 ctagttcctc tcgaacaaag tcctgtgttg gagcagtcga cgctgcagca caacaatcaa
961 acccgggtac agacatgcca aaacaaagcc caagtgcgct caaccaggcc tcagcccagt
1021 caggttggct ctagcagagg ccagaaaaac ctgaagagct actttcagcc ctcccctagc
1081 tgtccccaag cctctcctga catagagctg cctagcctac cactgatgag cgccctcatg
1141 accccgaaga ctccagaaga gaaggcagtg gccaaagtgg tgaaggggca ggccaagact
1201 tcagaagcca aagatgagaa ggagttacgg acctcattct ggaagtctgt gctggcgggg
1261 cccttgcgca cacccctctg tgggggccac agggagccat gtgtgatgcg tactgtgaag
1321 aagccaggac ccaacttggg ccgccgcttc tacatgtgtg ccaggccccg gggtcctccc
1381 actgacccct cctcccggtg caacttcttc ctctggagca ggcccagctg aaccaatgga
1441 ggcctgggga catctggcat ggtcacccct gcacatgatc tgaggccagc tccccttccc
1501 tgagctgcct cctgcttctc cctcaaagtc tcctaccctt ctcttcctct tttaagccct
1561 ctcttcctcg ctttccttcc tacctagctc cttgttggtg agcttcttgt gccttaatcc
1621 tgtgacccag ccccttacac cactttccac cttcctgtcc gaagtacacg gacactagct
1681 gccccaggaa gttgtgtgat tttaaatcac ttctgtcttt gctggaaagt gtatttgtgc
1741 ataaataaag tctgtgtatt tgtttcaggg tt
//