LOCUS AK301542 1847 bp mRNA linear HUM 31-JUL-2008
DEFINITION Homo sapiens cDNA FLJ57632 complete cds, highly similar to
Vacuolar ATP synthase subunit B, kidney isoform (EC 3.6.3.14).
ACCESSION AK301542
VERSION AK301542.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1847)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1847
/clone="TBAES2000308"
/clone_lib="TBAES2"
/db_xref="H-InvDB:HIT000496166"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="tumor tissue"
/organism="Homo sapiens"
/tissue_type="breast, tumor tissue"
CDS 77..1543
/codon_start=1
/note="highly similar to Vacuolar ATP synthase subunit B,
kidney isoform (EC 3.6.3.14)"
/protein_id="BAG63039.1"
/transl_table=1
/translation="MQAVTRNYITHPRVTYRTVCSVNGPLVVLDRVKFAQYAEIVHFT
LPDGTQRSGQVLEVAGTKAIVQVFEGTSGIDARKTTCEFTGDILRTPVSEDMLGRVFN
GSGKPIDKGPVVMAEDFLDINGQPINPHSRIYPEEMIQTGISPIDVMNSIARGQKIPI
FSAAGLPHNEIAAQICRQAGLVKKSKAVLDYHDDNFAIVFAAMGVNMETARFFKSDFE
QNGTMGNVCLFLNLANDPTIERIITPRLALTTAEFLAYQCEKHVLVILTDMSSYAEAL
REVSAAREEVPGRRGFPGYMYTDLATIYERAGRVEGRGGSITQIPILTMPNDDITHPI
PDLTGFITEGQIYVDRQLHNRQIYPPINVLPSLSRLMKSAIGEGMTRKDHGDVSNQLY
ACYAIGKDVQAMKAVVGEEALTSEDLLYLEFLQKFEKNFINQGPYENRSVFESLDLGW
KLLRIFPKEMLKRIPQAVIDEFYSREGALQDLAPDTAL"
BASE COUNT 396 a 572 c 521 g 358 t
ORIGIN
1 agagctgcca ccagcagcag gctcagacac tgggctcccc ggcagtagct gcaacctagg
61 tgcagcccga gaacacatgc aggcggtcac ccgaaactac atcacccacc cccgtgtcac
121 ctacaggact gtgtgcagcg tgaacgggcc cctggtggtg ctggaccggg tcaagtttgc
181 ccagtatgcg gagatcgtcc acttcaccct cccagatggg actcagagga gcgggcaggt
241 gcttgaggtg gctggcacca aggcgattgt tcaggtgttt gaagggacat cagggatcga
301 tgccaggaag accacttgcg aatttacagg ggacatccta cgaactccgg tgtcagagga
361 catgctgggt cgggttttca atggctccgg caagcccatt gacaaggggc cagtggtcat
421 ggcggaggac tttctggata tcaatggcca gcccatcaac ccgcactccc gcatctaccc
481 cgaggagatg attcagacgg gcatttctcc tattgacgtc atgaacagca ttgcccgcgg
541 ccagaagatc cccatcttct cagcagccgg gctcccccac aatgagattg ccgctcagat
601 ctgccgccag gcggggctgg tgaagaagtc caaggctgtg ctggattacc atgacgacaa
661 cttcgccatc gtctttgcag ccatgggggt gaacatggag acagccagat tcttcaagtc
721 tgactttgag cagaatggaa ccatggggaa cgtctgcctc ttcctgaact tggccaatga
781 ccccacgatc gagcggatca tcaccccgcg cctggcgctg accactgctg agttccttgc
841 ctaccagtgt gagaagcatg tgctggtcat actgacggac atgagttcct atgcagaggc
901 cttgcgggag gtctctgctg ctagagagga ggtgcctggg cgccgagggt ttcctggata
961 tatgtacaca gacctggcca ccatctacga gcgggcgggc cgcgtggagg gtcggggagg
1021 atccatcaca cagatcccca tcctcaccat gcccaacgac gatatcaccc accctatccc
1081 agacttgacg ggcttcatca cagagggaca gatctacgtg gacagacagc ttcacaacag
1141 acagatctac ccccccatca acgtgctccc ttccctgtcg cggctgatga agtcagccat
1201 tggggaaggc atgacaagaa aggaccatgg agatgtctcc aaccagctgt acgcctgcta
1261 tgccatcggg aaggacgtgc aggccatgaa ggcagtagtt ggggaggagg cgctcacctc
1321 tgaggacctg ctctacctgg aattcctgca gaagtttgag aagaacttca tcaatcaggg
1381 cccctacgag aaccgctcgg tgttcgagtc gctggacctg ggctggaagc tgctgcgcat
1441 cttccccaag gagatgctga agcgcattcc gcaggccgtg atcgacgagt tctattcccg
1501 cgagggggcg ctgcaggacc tcgcgcctga cactgcgctc tagccccgcg cgccgtggca
1561 ccccaacacc ggcagggaac ctaccctcgg ctcccgggtc tcccctccct cgccacccca
1621 accagcggct tctgcgccgc cctccgccct ccgctggctc cgaggtggtg ggggcgccgc
1681 acgctccatc cctttccctc gctcgattcc ttttcccgcg ctccatgcct ccccctcgac
1741 tcccggtgct gcggaagaac tgaaggttgc gatgccttac tctgacggga gcatctgtat
1801 ttttatgtta aaagcccaca aaataaaaat aaaaagtaac tgagatg
//