LOCUS AK301539 1774 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ50261 complete cds, highly similar to Zinc
transporter SLC39A6 precursor.
ACCESSION AK301539
VERSION AK301539.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1774)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1774
/clone="TBAES2000198"
/clone_lib="TBAES2"
/db_xref="H-InvDB:HIT000496163"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="tumor tissue"
/organism="Homo sapiens"
/tissue_type="breast, tumor tissue"
CDS 268..1500
/codon_start=1
/note="highly similar to Zinc transporter SLC39A6
precursor"
/protein_id="BAG63038.1"
/transl_table=1
/translation="MGIQVPLNATEFNYLCPAIINQIDARSCLIHTSEKKAEIPPKTY
SLQIAWVGGFIAISIISFLSLLGVILVPLMNRVFFKFLLSFLVALAVGTLSGDAFLHL
LPHSHASHHHSHSHEEPAMEMKRGPLFSHLSSQNIEESAYFDSTWKGLTALGGLYFMF
LVEHVLTLIKQFKDKKKKNQKKPENDDDVEIKKQLSKYESQLSTNEEKVDTDDRTEGY
LRADSQEPSHFDSQQPAVLEEEEVMIAHAHPQEVYNEYVPRGCKNKCHSHFHDTLGQS
DDLIHHHHDYHHILHHHHHQNHHPHSHSQRYSREELKDAGVATLAWMVIMGDGLHNFS
DGLAIGAAFTEGLSSGLSTSVALVDMVPEMLHNDASDHGCSRWGYFFLQNAGMLLGFG
IMLLISIFEHKIVFRINF"
BASE COUNT 477 a 381 c 408 g 508 t
ORIGIN
1 aattagtgat tgtcttccag cttcgcgaag gctaggggcg cggctgccgg gtggctgcgc
61 ggtgctgccc ccggaccgag gggcagccaa cccaatgaaa ccaccgcgtg ttcgcgcctg
121 gtagagattt ctcgaagaca ccagtgggcc cgttccgagc cctctggacc gcccgtgtgg
181 aaccaaacct gcgcgcgtgg ccgggccgtg ggacaacgag gccgcggaga ctgtttcaat
241 gcatcaaagc tactgacatc tcatggcatg ggcatccagg ttccgctgaa tgcaacagag
301 ttcaactatc tctgtccagc catcatcaac caaattgatg ctagatcttg tctgattcat
361 acaagtgaaa agaaggctga aatccctcca aagacctatt cattacaaat agcctgggtt
421 ggtggtttta tagccatttc catcatcagt ttcctgtctc tgctgggggt tatcttagtg
481 cctctcatga atcgggtgtt tttcaaattt ctcctgagtt tccttgtggc actggccgtt
541 gggactttga gtggtgatgc ttttttacac cttcttccac attctcatgc aagtcaccac
601 catagtcata gccatgaaga accagcaatg gaaatgaaaa gaggaccact tttcagtcat
661 ctgtcttctc aaaacataga agaaagtgcc tattttgatt ccacgtggaa gggtctaaca
721 gctctaggag gcctgtattt catgtttctt gttgaacatg tcctcacatt gatcaaacaa
781 tttaaagata agaagaaaaa gaatcagaag aaacctgaaa atgatgatga tgtggagatt
841 aagaagcagt tgtccaagta tgaatctcaa ctttcaacaa atgaggagaa agtagataca
901 gatgatcgaa ctgaaggcta tttacgagca gactcacaag agccctccca ctttgattct
961 cagcagcctg cagtcttgga agaagaagag gtcatgatag ctcatgctca tccacaggaa
1021 gtctacaatg aatatgtacc cagagggtgc aagaataaat gccattcaca tttccacgat
1081 acactcggcc agtcagacga tctcattcac caccatcatg actaccatca tattctccat
1141 catcaccacc accaaaacca ccatcctcac agtcacagcc agcgctactc tcgggaggag
1201 ctgaaagatg ccggcgtcgc cactctggcc tggatggtga taatgggtga tggcctgcac
1261 aatttcagcg atggcctagc aattggtgct gcttttactg aaggcttatc aagtggttta
1321 agtacttctg ttgctctggt tgatatggta cctgaaatgc tgcacaatga tgctagtgac
1381 catggatgta gccgctgggg gtatttcttt ttacagaatg ctgggatgct tttgggtttt
1441 ggaattatgt tacttatttc catatttgaa cataaaatcg tgtttcgtat aaatttctag
1501 ttaaggttta aatgctagag tagcttaaaa agttgtcata gtttcagtag gtcataggga
1561 gatgagtttg tatgctgtac tatgcagcgt ttaaagttag tgggttttgt gatttttgta
1621 ttgaatattg ctgtctgtta caaagtcagt taaaggtacg ttttaatatt taagttattc
1681 tatcttggag ataaaatctg tatgtgcaat tcaccggtat taccagttta ttatgtaaac
1741 aagagatttg gcatgacatg ttctgtatgt ttca
//