LOCUS AK301526 2021 bp mRNA linear HUM 21-JAN-2009
DEFINITION Homo sapiens cDNA FLJ54517 complete cds, highly similar to
RNA-binding protein Nova-1.
ACCESSION AK301526
VERSION AK301526.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2021)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..2021
/clone="SYNOV4009229"
/clone_lib="SYNOV4"
/db_xref="H-InvDB:HIT000496150"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="synovial membrane tissue from rheumatoid
arthritis"
CDS 469..1626
/codon_start=1
/note="highly similar to RNA-binding protein Nova-1"
/protein_id="BAH13506.1"
/transl_table=1
/translation="MPQNVAKTEPVSILQPQTTVNPDRIKQTLPSSPTTTKSSPSDPM
TTSRANQVKIIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPDGINLQERVVTVS
GEPEQNRKAVELIIQKIQEDPQSGSCLNISYANVTGPVANSNPTGSPYANTAEVLPTA
AAAAGLLGHANLAGVAAFPAVLSGFTGNDLVAITSALNTLASYGYNLNTLGLGLSQAA
ATGALAAAAASANPAAAAANLLATYASEASASGSTAGGTAGTFALGSLAAATAATNGY
FGAASPLAASAILGTEKSTDGSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQ
ISKKGEFVPGTRNRKVTITGTPAATQAAQYLITQRITYEQGVRAANPQKVG"
BASE COUNT 585 a 450 c 479 g 507 t
ORIGIN
1 atgatggcgg cagctcccat ccagcagaac gggacccaca ctggggttcc catagacctg
61 gacccgccgg actcgcggaa aaggccgctg gaagcccccc ctgaagccgg cagcaccaag
121 aggaccaata cgggcgaaga cggccagtat tttctaaagg ttctcatacc tagttatgct
181 gctggatcta taattgggaa gggaggacag acaattgttc agttgcaaaa agaaactgga
241 gccaccatca agctgtctaa gtccaaagat ttttacccag gtgctgacag ctgcagaaga
301 aattgtacat ggtgctgtac agaaggtatt tctccactgt gccatctgca gagtgaaact
361 gactaggagt actacataga ctgtactact gagcgagtgt gcttgatcca gggaacggtt
421 gaagcactga atgcagttca tggattcatt gcagaaaaaa ttcgagaaat gccccaaaat
481 gtggccaaga cagaaccagt cagcattcta caaccccaga ccaccgttaa tccagatcgc
541 atcaaacaaa cattgccatc ttccccaact accaccaagt cctctccatc tgatcccatg
601 accacctcca gagctaatca ggtaaagatt atagttccca acagcacagc aggtctgata
661 atagggaagg gaggtgctac tgtgaaggct gtaatggagc agtcaggggc ttgggtgcag
721 ctttcccaga aacctgatgg gatcaacttg caagagaggg ttgtcactgt gagtggagaa
781 cctgaacaaa accgaaaagc tgttgaactt atcatccaga agatacaaga ggatccacaa
841 agtggcagct gtctcaatat cagttatgcc aatgtgacag gtccagtggc aaattccaat
901 ccaaccggat ctccttatgc aaacactgct gaagtgttac caactgctgc agcagctgca
961 gggctattag gacatgctaa ccttgctggc gttgcagcct ttccagcagt tttatctggc
1021 ttcacaggca atgacctggt ggccatcacc tctgcactta atacattagc cagctatgga
1081 tataatctca acactttagg tttaggtctc agtcaagcag cagcaacagg ggctttggct
1141 gcagcagctg ccagtgccaa cccagcagca gcagcagcca atttattggc cacctatgcc
1201 agtgaagcct cagccagtgg cagcacagct ggtggtacgg cggggacatt tgcattaggt
1261 agcctggctg ctgctactgc tgcaaccaat ggatattttg gagctgcttc tcccctagct
1321 gccagtgcca ttctaggaac agaaaagtcc acagatggat ccaaggatgt agttgaaata
1381 gcagtgccag aaaacttagt tggtgcaata cttggcaaag gagggaaaac attagtggaa
1441 taccaggagt tgactggtgc aaggatacag atctccaaaa aaggagaatt cgtacctggc
1501 acaaggaatc ggaaggtaac cattactgga acaccagctg caacacaggc tgctcaatat
1561 ttaattacac aaaggatcac atatgagcaa ggagttcggg ctgccaatcc tcagaaagtg
1621 ggttgagtgc cccagttaca catcagattg ttttaacccc tcctttaccc cattttcaag
1681 aaggatgtac tgtactttgc agaagtgaag tttttctgtt attaatatat aattatgcaa
1741 atgaatgcga ctatgttgac aatgtgtata tgtaaataat atgtgtttta ccagatgttt
1801 catagaaaga attttttctt gatctgtttt gttctctata ctttgcttgt gtatatttgt
1861 cagaggtgtt tctagtgtaa gatttaagcc tgccatttta ccagcattat tgtagtttaa
1921 tgattgaatg tagacaggga tatgcgtata gttttcagta ttagttctag ataacactaa
1981 attaactact gttaggttga gtatggtggg gtcagtgacc t
//