LOCUS AK301465 2304 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ54484 complete cds, highly similar to Homo
sapiens pleckstrin homology domain containing, family A member 7
(PLEKHA7), mRNA.
ACCESSION AK301465
VERSION AK301465.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2304)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..2304
/clone="SYNOV4001753"
/clone_lib="SYNOV4"
/db_xref="H-InvDB:HIT000496089"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="synovial membrane tissue from rheumatoid
arthritis"
CDS 125..1975
/codon_start=1
/note="highly similar to Homo sapiens pleckstrin homology
domain containing, family A member 7 (PLEKHA7), mRNA"
/protein_id="BAG62985.1"
/transl_table=1
/translation="MSSEERRAHRDGTVWQLYEWQQRQQFRHGSPTAPICLGSPEFTD
QGRSRSMLEVPRSISVPPSPSDIPPPGPPRVFPPRRPHTPAERVTVKPPDQRRSVDIS
LGDSPRRARGHAVKNSSHVDRRSMPSMGYMTHTVSAPSLHGKSADDTYLQLKKDLEYL
DLKMTGRDLLKDRSLKPVKIAESDTDVKLSIFCEQDRVLQDLEDKIRALKENKDQLES
VLEVLHRQMEQYRDQPQHLEKIAYQQKLLQEDLVHIRAELSRESTEMENAWNEYLKLE
NDVEQLKQTLQEQHRRAFFFQEKSQIQKDLWRIEDVTAGLSANKENFRILVESVKNPE
RKTVPLFPHPPVPSLSTSESKPPPQPSPPTSPVRTPLEVRLFPQLQTYVPYRPHPPQL
RKVTSPLQSPTKAKPKVQEDEAPPRPPLPELYSPEDQPPAVPPLPREATIIRHTSVRG
LKRQSDERKRDRELGQCVNGDSRVELRSYVSEPELATLSGDMAQPSLGLVGPESRYQT
LPGRGLSGSTSRLQQSSTIAPYVTLRRGLNAESSKATFPRPKSALERLYSGDHQRGKM
SAEEQLERMKRHQKALVRERKRTLGQGERTGLPSSRYLSRPLPGDLGSVC"
BASE COUNT 572 a 704 c 656 g 372 t
ORIGIN
1 cttcccagaa aactaccaga ctcttcccaa gagcacccga cacccctcgg ggggctcctc
61 gccacctccc cgaaacctgc caagtaacta caagtatgcg caggaccgag ccagccacct
121 gaagatgtcg agtgaagagc gccgggcgca ccgggatggc accgtgtggc agctctacga
181 gtggcagcag cgccagcagt tccggcacgg cagccccaca gcgcccatct gccttggctc
241 cccagagttc accgaccagg gccggagcag gagcatgcta gaggtgcccc gctccatctc
301 tgtgcctcca tctccctcgg acatccctcc cccaggaccc ccaagggtct tcccaccccg
361 gcggccacac acaccagcag agcgagtcac agtgaagcca ccggaccaga ggaggagtgt
421 ggacatctcg ctgggggatt ctccaaggag ggcacggggc cacgctgtca agaactcatc
481 tcatgtggac cgacgctcca tgccctccat gggttacatg acccacaccg tcagcgctcc
541 cagtttacat ggaaaatcgg ctgatgatac ctacctccag ctgaagaaag acctggagta
601 cctggatcta aagatgacag gccgggacct tctcaaggat cgaagtctga agcctgtgaa
661 gatcgctgag agcgacactg acgtcaaact gagcatcttc tgtgaacaag acagggtcct
721 ccaggacttg gaagacaaga tacgagccct taaagagaac aaagaccagc tagaatctgt
781 gctggaggtg ttgcacagac agatggagca gtaccgagac cagccccagc acttggagaa
841 gattgcctac cagcagaagt tgctgcagga ggaccttgtc catatccgag ctgagctctc
901 cagagagtcc actgagatgg aaaatgcttg gaacgaatac ctgaagttgg agaatgatgt
961 ggaacagctg aagcagaccc tgcaggagca acacagaaga gccttttttt tccaggagaa
1021 atcgcagata cagaaagatc tatggagaat tgaagatgtc actgcaggcc tgagtgcaaa
1081 taaagagaac ttcagaattc tagtggagtc agtaaaaaat ccggagagaa aaacggtgcc
1141 tttgtttcct cacccgcctg tgccttcact ctcaacttct gagagcaagc cgcccccaca
1201 gcccagtcct cccaccagcc ctgtgcggac ccctctggag gttcgactct tcccccagct
1261 gcaaacctac gtgccgtacc gacctcaccc accccagctg aggaaagtga catcccccct
1321 tcagtcacca actaaggcga agcccaaagt tcaggaagat gaagcacctc ccaggccccc
1381 actccccgaa ctctacagcc cagaggacca gcccccggct gtgccgcctc tgccaagaga
1441 ggccaccatc atccggcaca catctgtgcg gggcctcaag cggcagtcag acgagaggaa
1501 gcgagaccgg gagctggggc agtgtgtgaa tggggattcc agggtggagc tgcggtcgta
1561 tgtcagtgag cctgagctgg cgaccctcag cggggacatg gcccagccct ccctaggact
1621 tgtgggccct gagagcaggt accagacgct gccaggcaga gggctctcag ggtccacgtc
1681 aaggctccag cagtcgtcca ccattgctcc ctacgtcaca ctccggaggg gtctcaatgc
1741 cgaaagcagc aaggcgacct tccctagacc taagagtgcc ttggagcgcc tgtactcagg
1801 ggatcaccag cgaggcaaga tgagtgcaga ggagcagctg gagcgcatga agcgacacca
1861 gaaggccctg gtccgagagc gcaagaggac actgggccaa ggggagagga cgggcctgcc
1921 ctcatctcgc tacctcagcc ggccgctccc tggagatctt ggctcagtat gttaggaggg
1981 gccaggcagc ggggcaggga cagggagccg agtgcccctc agagtccccc aaacacaagc
2041 acatcacacc tcccagtgag agagctgtcc attgacctac atggttcaga gaacacccca
2101 cggggctgtt tgtccacgac ccaggctgga cgaatgcctg gtcagagggt gacctgaacc
2161 agagctggag tgaggatcaa acaggcccag gagcctgagg aaatacccag tcagtcctcc
2221 cagccgcgat ggagaggggc ctttgcaggc gttcggaatc tcggctgaat tcaggacctg
2281 ggaatacagg gttcagagag gaga
//