LOCUS AK301445 1530 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ57214 complete cds, highly similar to TBC1
domain family member 22A.
ACCESSION AK301445
VERSION AK301445.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1530)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1530
/clone="SYNOV2021280"
/clone_lib="SYNOV2"
/db_xref="H-InvDB:HIT000496069"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="synovial membrane tissue from rheumatoid
arthritis"
CDS 149..1360
/codon_start=1
/note="highly similar to TBC1 domain family member 22A"
/protein_id="BAG62971.1"
/transl_table=1
/translation="MASDGARKQFWKRSNSKLPGSIQHVYGAQHPPFDPLLHGTLLRS
TAKMPTTPVKAKRVSTFQEFESNTSTLSSSALSEREASRLDKFKQLLAGPNTDLEELR
RLSWSGIPKPVRPMTWKLLSGYLPANVDRRPATLQRKQKEYFAFIEHYYDSRNDEVHQ
DTYRQIHIDIPRMSPEALILQPKVTEIFERILFIWAIRHPASGYVQGINDLVTPFFVV
FICEYIEAEEVDTVDVSGVPAEVLCNIEADTYWCMSKLLDGIQDNYTFAQPGIQMKVK
MLEELVSRIDEQVHRHLDQHEVRYLQFAFRWMNNLLMREVPLRCTIRLWDTYQSEPDG
FSHFHLYVCAAFLVRWRKELLEEKDFQELLLFLQNLPTAHWDDEDISLLLAEAYRLKF
AFADAPNHYKK"
BASE COUNT 353 a 430 c 448 g 299 t
ORIGIN
1 cggaaggagg cggaagagct tctcggctct aggctctgga gtcccgggag cagtgagggg
61 ccacccgggg cacaggaaag ggccgctagg ggagggccgg gtgcactcgg ggtgtctggg
121 ccgcgggtct gagggatgag gaggggccat ggccagcgac ggggccagga agcaattctg
181 gaagcgcagc aacagcaagc tcccgggcag catccagcac gtgtatggtg cccagcaccc
241 cccctttgat ccactgttac atggcacttt gctcaggtcc acggccaaga tgccgaccac
301 accagtgaag gccaagaggg tcagcacctt ccaggagttt gagagcaata ccagcactct
361 cagcagctca gcgctgagcg aaagagaggc ctcccggctc gacaagttca agcagctgct
421 tgccggcccc aacacggacc ttgaggaatt acggaggttg agctggtccg gaatccctaa
481 gccagtgcgt ccaatgacgt ggaagctcct ctcaggttac cttcccgcca atgtagaccg
541 gagaccagcc actctccaga gaaaacaaaa agaatatttt gcatttattg agcactatta
601 cgattctagg aacgacgaag ttcaccagga cacatacagg cagatccaca tagacatccc
661 tcgcatgagc cctgaagcgt tgatcctgca gcccaaggtg acggagattt ttgaaaggat
721 cttgttcata tgggcgatcc gccacccagc cagtggatac gttcagggta taaatgatct
781 cgtcactcct ttctttgtgg tcttcatttg tgaatacata gaggcagagg aggtggacac
841 ggtggacgtc tccggcgtgc ccgcagaggt gctgtgcaac atcgaggccg acacctactg
901 gtgcatgagc aagctgctgg acggcattca ggacaactac acctttgccc aacctgggat
961 tcaaatgaaa gtgaaaatgt tagaagaact cgtgagccgg attgatgagc aagtgcaccg
1021 gcacctggac caacacgaag tgagatacct gcagtttgcc ttccgctgga tgaacaacct
1081 gctgatgagg gaggtgcccc tgcgttgtac catccgcctg tgggacacct accagtctga
1141 accggacggc ttttctcatt tccacttgta cgtgtgcgct gcttttctcg tgagatggag
1201 gaaggaatta ctagaagaaa aagattttca agagctgctg ctcttcctcc agaacctgcc
1261 cacagcccac tgggatgatg aggacatcag cctgttgctg gccgaggcct accgcctcaa
1321 gtttgctttt gccgacgccc ccaatcacta caagaaatga gcccaggccc acccgcagct
1381 ggcctcactg tcccgggtgg cgcgccccac ctgcctggct ggtggtaggc ccctgtgagc
1441 tggtcccggg ctgctaaaag gccttgtgag gtggccccac cctccagggg agctggtgaa
1501 gatgggccac agacctggtc tagggctgac
//