LOCUS AK301392 1877 bp mRNA linear HUM 21-JAN-2009
DEFINITION Homo sapiens cDNA FLJ51118 complete cds, highly similar to
Bestrophin-1.
ACCESSION AK301392
VERSION AK301392.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1877)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1877
/clone="SYNOV2012912"
/clone_lib="SYNOV2"
/db_xref="H-InvDB:HIT000496016"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="synovial membrane tissue from rheumatoid
arthritis"
CDS 228..1667
/codon_start=1
/note="highly similar to Bestrophin-1"
/protein_id="BAH13472.1"
/transl_table=1
/translation="MSLVSGFVEGKDEQGRLLRRTLIRYANLGNVLILRSVSTAVYKR
FPSAQHLVQAGFMTPAEHKQLEKLSLPHNMFWVPWVWFANLSMKAWLGGRIRDPILLQ
SLLNEMNTLRTQCGHLYAYDWISIPLVYTQVVTVAVYSFFLTCLVGRQFLNPAKAYPG
HELDLVVPVFTFLQFFFYVGWLKVAEQLINPFGEDDDDFETNWIVDRNLQVSLLAVDE
MHQDLPRMEPDMYWNKPEPQPPYTAASAQFRRASFMGSTFNISLNKEEMEFQPNQEDE
EDAHAGIIGRFLGLQSHDHHPPRANSRTKLLWPKRESLLHEGLPKNHKAAKQNVRGQE
DNKAWKLKAVDAFKSAPLYQRPGYYSAPQTPLSPTPMFFPLEPSAPSKLHSVTGIDTK
DKSLKTVSSGAKKSFELLSESDGALMEHPEVSQVRRKTVEFNLTDMPEIPENHLKEPL
EQSPTNIHTTLKDHMDPYWALENRDEAHS"
BASE COUNT 464 a 536 c 502 g 375 t
ORIGIN
1 cctgtggccg cccaggctcc agacaggcca ggggaggatc acgaggagct gcggcaaggg
61 gctggggagg gggcggggga acgccagcgg caggtcggcg cctctctgta gggaaaggtg
121 cggactgcag ccagagaaac tgaagttaga cgttaggctt ctacgtgacg ctggtcgtga
181 cccgctggtg gaaccagtac gagaacctgc cgtggcccga ccgcctcatg agcctggtgt
241 cgggcttcgt cgaaggcaag gacgagcaag gccggctgct gcggcgcacg ctcatccgct
301 acgccaacct gggcaacgtg ctcatcctgc gcagcgtcag caccgcagtc tacaagcgct
361 tccccagcgc ccagcacctg gtgcaagcag gctttatgac tccggcagaa cacaagcagt
421 tggagaaact gagcctacca cacaacatgt tctgggtgcc ctgggtgtgg tttgccaacc
481 tgtcaatgaa ggcgtggctt ggaggtcgaa tccgggaccc tatcctgctc cagagcctgc
541 tgaacgagat gaacaccttg cgtactcagt gtggacacct gtatgcctac gactggatta
601 gtatcccact ggtgtataca caggtggtga ctgtggcggt gtacagcttc ttcctgactt
661 gtctagttgg gcggcagttt ctgaacccag ccaaggccta ccctggccat gagctggacc
721 tcgttgtgcc cgtcttcacg ttcctgcagt tcttcttcta tgttggctgg ctgaaggtgg
781 cagagcagct catcaacccc tttggagagg atgatgatga ttttgagacc aactggattg
841 tcgacaggaa tttgcaggtg tccctgttgg ctgtggatga gatgcaccag gacctgcctc
901 ggatggagcc ggacatgtac tggaataagc ccgagccaca gcccccctac acagctgctt
961 ccgcccagtt ccgtcgagcc tcctttatgg gctccacctt caacatcagc ctgaacaaag
1021 aggagatgga gttccagccc aatcaggagg acgaggagga tgctcacgct ggcatcattg
1081 gccgcttcct aggcctgcag tcccatgatc accatcctcc cagggcaaac tcaaggacca
1141 aactactgtg gcccaagagg gaatcccttc tccacgaggg cctgcccaaa aaccacaagg
1201 cagccaaaca gaacgttagg ggccaggaag acaacaaggc ctggaagctt aaggctgtgg
1261 acgccttcaa gtctgcccca ctgtatcaga ggccaggtta ctacagtgcc ccacagacgc
1321 ccctcagccc cactcccatg ttcttccccc tagaaccatc agcgccgtca aagcttcaca
1381 gtgtcacagg catagacacc aaagacaaaa gcttaaagac tgtgagttct ggggccaaga
1441 aaagttttga attgctctca gagagcgatg gggccttgat ggagcaccca gaagtatctc
1501 aagtgaggag gaaaaccgtg gagtttaacc tgacggatat gccagagatc cccgaaaatc
1561 acctcaaaga acctttggaa caatcaccaa ccaacataca cactacactc aaagatcaca
1621 tggatcctta ttgggccttg gaaaacaggg atgaagcaca ttcctaacct gcttcctaat
1681 ggggatgctt cgccagccag gtcctcacct gtgtgtacac cagcaggaca ctgatccagt
1741 cacagccata cagctgtcca cactgaagaa catgtcctac aacagcctga atcaaatggt
1801 tagcttaata gataaaaatc ccagactact tcagccttta atgcctttta ttcataaaaa
1861 ctgtgaaagc tagactg
//