LOCUS AK301360 1507 bp mRNA linear HUM 21-JAN-2009
DEFINITION Homo sapiens cDNA FLJ61640 complete cds, highly similar to
NF-kappa-B inhibitor epsilon.
ACCESSION AK301360
VERSION AK301360.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1507)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1507
/clone="SYNOV2006062"
/clone_lib="SYNOV2"
/db_xref="H-InvDB:HIT000495984"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="synovial membrane tissue from rheumatoid
arthritis"
CDS 207..1292
/codon_start=1
/note="highly similar to NF-kappa-B inhibitor epsilon"
/protein_id="BAH13464.1"
/transl_table=1
/translation="MSEARKGPDEAEESQYDSGIESLRSLRSLPESTSAPASGPSDGS
PQPCTHPPGPVKEPQEKEDADGERADSTYGSSSLTYTLSLLGGPEAEDPAPRLPLPHV
GALSPQQLEALTYISEDGDTLVHLAVIHEAPAVLLCCLALLPQEVLDIQNNLYQTALH
LAVHLDQPGAVRALVLKGASRALQDRHGDTALHVACQRQHLACARCLLEGRPEPGRGT
SHSLDLQLQNWQGLACLHIATLQKNQPLMELLLRNGADIDVQEGTSGKTALHLAVETQ
ERGLVQFLLQAGAQVDARMLNGCTPLHLAAGRGLMGISSTLCKAGADSLLRNVEDETP
QDLTEESLVLLPFDDLKISGKLLLCTD"
BASE COUNT 277 a 493 c 482 g 255 t
ORIGIN
1 ttggaaccgc tgggtggacc tggccagcgc tccgaacctt gtcctcgctg cgcgccggcc
61 cctcggagcc ccacagcccg ggaaggaggc cgccgcgggc cgggcgcccg ctctgccaag
121 cggacccgca acccggaaag gcggcgcggc ggagcctgga gccggatcct gctcagaccg
181 ggccccggcc ggccagagcc gcgggcatgt cggaggcgcg gaaggggccg gacgaggcgg
241 aggagagcca gtacgactct ggcattgagt ctctgcgctc tctgcgctcc ctacccgagt
301 ccacctcggc tccagcctcc gggccctcgg acggcagccc ccagccctgc acccatcctc
361 cgggacccgt caaggaacca caggagaagg aagacgcgga tggggagcgg gctgattcca
421 cctatggctc ctcctcgctc acctacaccc tgtccttgct ggggggcccc gaggctgagg
481 acccggcccc acgcctgcca ctcccccacg tgggggcgct gagccctcag cagctggaag
541 cactcactta catctccgag gacggagaca cgctggtcca cctggcagtg attcatgagg
601 ccccagcggt gctgctctgt tgcctggctt tgctgcccca ggaggtcctg gacattcaaa
661 ataaccttta ccagacagca ctccatctgg ctgtacatct ggaccaaccg ggcgcagttc
721 gggcactggt gctgaagggg gccagccggg cactacagga ccggcatggt gacacagccc
781 ttcatgtggc ctgccagcgc cagcacttgg cctgtgcccg ctgcctgctg gaagggcggc
841 cagagccagg cagaggaaca tctcactctc tggacctcca gctgcaaaac tggcaaggtc
901 tggcttgtct ccacattgcc acccttcaga agaaccaacc actcatggaa ttgctgcttc
961 ggaatggagc tgacattgat gtgcaggagg gcaccagtgg taagacagcg ctgcacctgg
1021 ctgtggaaac ccaagagcgg ggcctggtac agttcctgct ccaggctggt gcccaggtag
1081 atgcccgcat gctgaacggg tgcacacccc tgcacctggc agctggccgg ggtctcatgg
1141 gcatctcatc cactctgtgc aaggcgggtg ctgactccct gctgcggaat gtggaggatg
1201 agacgcccca ggacctgact gaggaatccc ttgtcctttt gccctttgat gacctgaaga
1261 tctcagggaa actgctgctg tgtaccgact gaagccaggc agggtctggg atcctcaggg
1321 ctccacctct ccatctggaa gccggagcca taactgctgc agtttgggcc caggctatgt
1381 gctcttctgg tgccctaggg actgctgtgg ccagagcctg gggccagcca gtacagtcct
1441 gagccgagga ggagggactg caagtggaag agagccagtc tggaaggaag agctttccag
1501 gtggaca
//