LOCUS AK301347 1351 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ54187 complete cds, highly similar to Homo
sapiens polymerase (RNA) I associated factor 1 (PRAF1), mRNA.
ACCESSION AK301347
VERSION AK301347.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1351)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1351
/clone="SYNOV2004652"
/clone_lib="SYNOV2"
/db_xref="H-InvDB:HIT000495971"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="synovial membrane tissue from rheumatoid
arthritis"
CDS 104..664
/codon_start=1
/note="highly similar to Homo sapiens polymerase (RNA) I
associated factor 1 (PRAF1), mRNA"
/protein_id="BAG62895.1"
/transl_table=1
/translation="MAAEVLPSARWQYCGAPDGSQRAVLVQFSNGKLQSPGNMRFTLY
ENKDSTNPRKRNQRILAAETDRLSYVGNNFGTGALKCNTLCRHFVGILNKTSGQMEVY
DAELFNMQPLFSDVSVESELALESQTKTYREKMTPSTFLPAMMMQPSLKTCINLKIFF
PLWRAETARPDAYGFWIPSSNFELIG"
BASE COUNT 354 a 322 c 363 g 312 t
ORIGIN
1 ttttttttcc ggcccgcagc gcggcctggg ctcccgcgtg tttaaaagtg cgcttgtggc
61 tgctgctgtc ttaactcctg tgcttggcgg acagacaggc gagatggcgg cggaggtgtt
121 gccgagtgcg aggtggcagt attgtggggc gcccgacggg agccagagag ctgtactggt
181 ccagttctcc aacgggaagc tacagagtcc aggcaacatg cgctttacct tgtatgagaa
241 caaagattcc accaacccca ggaagaggaa tcaacggatc ctggcagctg aaacagatag
301 gctctcctat gtgggaaaca attttgggac tggagccctc aaatgcaaca ctttgtgcag
361 gcactttgtg ggaattttga acaagacctc tggccaaatg gaagtgtatg atgctgaatt
421 gttcaacatg cagccactat tttcagatgt atcagttgag agtgaactgg cgctagagag
481 tcagaccaaa acttacagag aaaagatgac tccctctacc ttcctccctg ctatgatgat
541 gcagccaagc ctgaagacgt gtataaattt gaagatcttc tttcccctgt ggagagccga
601 gaccgccagg cccgatgcat atggtttctg gataccctca tcaaatttcg agctcatagg
661 gtagttaagc ggaaaagtgc tctgggacct ggagttcccc acatcatcaa caccaaactg
721 ctgaagcact ttacttgctt gacctacaac aatggcagat tacggaactt aatttcggat
781 tctatgaagg cgaagattac tgcatatgtg atcatacttg ccttgcacat acatgacttc
841 caaattgacc tgacagtgtt acagagggac ttgaagctca gtgagaaaag gatgatggag
901 atagccaaag ccatgaggct gaagatctcc aaaagaaggg tgtctgtggc cgccggcagt
961 gaagaagatc acaaactggg caccctgtcc ctcccgctgc ctccagccca gacctcagac
1021 cgcctggcaa agcggaggaa gattacctag acgcatgctt tccagacagg gcgttttggc
1081 tgcatcacag ctactggctg gtcctattca tttccatttt tatgtatgtt ttgaaaagaa
1141 aaggtccggg gatggtggct cacacctgaa atcccagcac tttgggaggc cgaggcagga
1201 agatcattga gctcaggagt ttgaaaccag tctggacaac atagggagac cccatctcta
1261 ccggaggaaa aaaaaaagag tcaggcctgg tggtgtgcgc ctgtaatccc agctactcgg
1321 gaggctgagg caggacgatt acttgagctt g
//