LOCUS AK301345 1874 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ54186 complete cds, highly similar to Nuclear
receptor-binding protein.
ACCESSION AK301345
VERSION AK301345.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1874)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1874
/clone="SYNOV2004563"
/clone_lib="SYNOV2"
/db_xref="H-InvDB:HIT000495969"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="synovial membrane tissue from rheumatoid
arthritis"
CDS 104..1651
/codon_start=1
/note="highly similar to Nuclear receptor-binding protein"
/protein_id="BAG62893.1"
/transl_table=1
/translation="MSEGESQTSVSPPVTSTTSAASPEEEEESEDESEILEESPCGRW
QKRREEVNQRNVPGIDSAYLAMDTEEGVEVVWNEVQFSERKNYKLQEEKVRAVFDNLI
QLEHLNIVKFHKYWADIKENKARVIFITEYMSSGSLKQFLKKTKKNHKTMNEKAWKRW
CTQILSALSYLHSCDPPIIHGNLTCDTIFIQHNGLIKIGSVAPDTINNHVKTCREEQK
NLHFFAPEYGEVTNVTTAVDIYSFGMCALEMAVLEIQGNGESSYVPQEAISSAIQLLE
DPLQREFIQKCLQSEPARRPTARELLFHPALFEVPSLKLLAAHCIVGHQHMIPENALE
EITKNMDTSAVLAEIPAGPGREPVQTLYSQSPALELDKFLEDVRNGIYPLTAFGLPRP
QQPQQEEVTSPVVPPSVKTPTPEPAEVETRKVVLMQCNIESVEEGVKHHLTLLLKLED
KLNRHLSCDLMPNENIPELAAELVQLGFISEADQSRLTSLLEETLNKFNFARNSTLNS
AAVTVSS"
BASE COUNT 465 a 491 c 495 g 423 t
ORIGIN
1 atcgttggtc cgggcgccgc gagggcgggg cccgcagttc ggttgcgctg cggagcgcag
61 ctgtgaggga gtcgggagtg caggcctgag tgttccttcc agcatgtcgg agggggagtc
121 ccagacatca gtgtcacctc ctgtgacctc cacaacctca gctgcttccc cagaggaaga
181 agaagaaagt gaagatgagt ctgagatttt ggaagagtcg ccctgtgggc gctggcagaa
241 gaggcgagaa gaggtgaatc aacggaatgt accaggtatt gacagtgcat acctggccat
301 ggatacagag gaaggtgtag aggttgtgtg gaatgaggta cagttctctg aacgcaagaa
361 ctacaagctg caggaggaaa aggttcgtgc tgtgtttgat aatctgattc aattggagca
421 tcttaacatt gttaagtttc acaaatattg ggctgacatt aaagagaaca aggccagggt
481 catttttatc acagaataca tgtcatctgg gagtctgaag caatttctga agaagaccaa
541 aaagaaccac aagacgatga atgaaaaggc atggaagcgt tggtgcacac aaatcctctc
601 tgccctaagc tacctgcact cctgtgaccc ccccatcatc catgggaacc tgacctgtga
661 caccatcttc atccagcaca acggactcat caagattggc tctgtggctc ctgacactat
721 caacaatcat gtgaagactt gtcgagaaga gcagaagaat ctacacttct ttgcaccaga
781 gtatggagaa gtcactaatg tgacaacagc agtggacatc tactcctttg gcatgtgtgc
841 actggagatg gcagtgctgg agattcaggg caatggagag tcctcatatg tgccacagga
901 agccatcagc agtgccatcc agcttctaga agacccatta cagagggagt tcattcaaaa
961 gtgcctgcag tctgagcctg ctcgcagacc aacagccaga gaacttctgt tccacccagc
1021 attgtttgaa gtgccctcgc tcaaactcct tgcggcccac tgcattgtgg gacaccaaca
1081 catgatccca gagaacgctc tagaggagat caccaaaaac atggatacta gtgccgtact
1141 ggctgaaatc cctgcaggac caggaagaga accagttcag actttgtact ctcagtcacc
1201 agctctggaa ttagataaat tccttgaaga tgtcaggaat gggatctatc ctctgacagc
1261 ctttgggctg cctcggcccc agcagccaca gcaggaggag gtgacatcac ctgtcgtgcc
1321 cccctctgtc aagactccga cacctgaacc agctgaggtg gagactcgca aggtggtgct
1381 gatgcagtgc aacattgagt cggtggagga gggagtcaaa caccacctga cacttctgct
1441 gaagttggag gacaaactga accggcacct gagctgtgac ctgatgccaa atgagaatat
1501 ccccgagttg gcggctgagc tggtgcagct gggcttcatt agtgaggctg accagagccg
1561 gttgacttct ctgctagaag agaccttgaa caagttcaat tttgccagga acagtaccct
1621 caactcagcc gctgtcaccg tctcctctta gagctcactc gggccaggcc ctgatctgcg
1681 ctgtggctgt ccctggacgt gctgcagccc tcctgtccct tccccccagt cagtattacc
1741 ctgtgaagcc ccttccctcc tttattattc aggagggctg ggggggctcc ctggttctga
1801 gcatcatcct ttcccctccc ctctcttcct cccctctgca ctttgtttac ttgttttgca
1861 cagacgtggg cctg
//