LOCUS AK301311 1555 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ50031 complete cds, highly similar to Homo
sapiens V-set and immunoglobulin domain containing 1 (VSIG1), mRNA.
ACCESSION AK301311
VERSION AK301311.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1555)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1555
/clone="STOMA2005937"
/clone_lib="STOMA2"
/db_xref="H-InvDB:HIT000495935"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="stomach"
CDS 62..1333
/codon_start=1
/note="highly similar to Homo sapiens V-set and
immunoglobulin domain containing 1 (VSIG1), mRNA"
/protein_id="BAG62862.1"
/transl_table=1
/translation="MVFAFWKVFLILSCLAGQVSVVQVTIPDGFVNVTVGSNVTLICI
YTTTVASREQLSIQWSFFHKKEMEPISHSSCLSTEGMEEKAVSQCLKMTHARDARGRC
SWTSEIYFSQGGQAVAIGQFKDRITGSNDPGNASITISHMQPADSGIYICDVNNPPDF
LGQNQGILNVSVLVKPSKPLCSVQGRPETGHTISLSCLSALGTPSPVYYWHKLEGRDI
VPVKENFNPTTGILVIGNLTNFEQGYYQCTAINRLGNSSCEIDLTSSHPEVGIIVGAL
IGSLVGAAIIISVVCFARNKAKAKAKERNSKTIAELEPMTKINPRGESEAMPREDATQ
LEVTLPSSIHETGPDTIQEPDYEPKPTQEPAPEPAPGSEPMAVPDLDIELELEPETQS
ELEPEPEPEPESEPGVVVEPLSEDEKGVVKA"
BASE COUNT 451 a 394 c 346 g 364 t
ORIGIN
1 gagactcagc ctagtccagg caagctactg gcacctgctg ctctcaacta acctccacac
61 aatggtgttc gcattttgga aggtctttct gatcctaagc tgccttgcag gtcaggttag
121 tgtggtgcaa gtgaccatcc cagacggttt cgtgaacgtg actgttggat ctaatgtcac
181 tctcatctgc atctacacca ccactgtggc ctcccgagaa cagctttcca tccagtggtc
241 tttcttccat aagaaggaga tggagccaat ttctcacagc tcgtgcctca gtactgaggg
301 tatggaggaa aaggcagtca gtcagtgtct aaaaatgacg cacgcaagag acgctcgggg
361 aagatgtagc tggacctctg agatttactt ttctcaaggt ggacaagctg tagccatcgg
421 gcaatttaaa gatcgaatta cagggtccaa cgatccaggt aatgcatcta tcactatctc
481 gcatatgcag ccagcagaca gtggaattta catctgcgat gttaacaacc ccccagactt
541 tctcggccaa aaccaaggca tcctcaacgt cagtgtgtta gtgaaacctt ctaagcccct
601 ttgtagcgtt caaggaagac cagaaactgg ccacactatt tccctttcct gtctctctgc
661 gcttggaaca ccttcccctg tgtactactg gcataaactt gagggaagag acatcgtgcc
721 agtgaaagaa aacttcaacc caaccaccgg gattttggtc attggaaatc tgacaaattt
781 tgaacaaggt tattaccagt gtactgccat caacagactt ggcaatagtt cctgcgaaat
841 cgatctcact tcttcacatc cagaagttgg aatcattgtt ggggccttga ttggtagcct
901 ggtaggtgcc gccatcatca tctctgttgt gtgcttcgca aggaataagg caaaagcaaa
961 ggcaaaagaa agaaattcta agaccatcgc ggaacttgag ccaatgacaa agataaaccc
1021 aaggggagaa agcgaagcaa tgccaagaga agacgctacc caactagaag taactctacc
1081 atcttccatt catgagactg gccctgatac catccaagaa ccagactatg agccaaagcc
1141 tactcaggag cctgccccag agcctgcccc aggatcagag cctatggcag tgcctgacct
1201 tgacatcgag ctggagctgg agccagaaac gcagtcggaa ttggagccag agccagagcc
1261 agagccagag tcagagcctg gggttgtagt tgagccctta agtgaagatg aaaagggagt
1321 ggttaaggca taggctggtg gcctaagtac agcattaatc attaaggaac ccattactgc
1381 catttggaat tcaaataacc taaccaacct ccacctcctc cttccatttt gaccaacctt
1441 cttctaacaa ggtgctcatt cctactatga atccagaata aacacgccaa gataacagct
1501 aaatcagcaa gggttcctgt attaccaata tagaatacta acaattttac taaca
//