LOCUS AK301239 2311 bp mRNA linear HUM 21-JAN-2009
DEFINITION Homo sapiens cDNA FLJ59769 complete cds, highly similar to Homo
sapiens pleckstrin homology domain containing, family G (with
RhoGef domain) member 5, transcript variant 1, mRNA.
ACCESSION AK301239
VERSION AK301239.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2311)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..2311
/clone="SPLEN2035123"
/clone_lib="SPLEN2"
/db_xref="H-InvDB:HIT000495863"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="spleen"
CDS 43..2253
/codon_start=1
/note="highly similar to Homo sapiens pleckstrin homology
domain containing, family G (with RhoGef domain) member
5, transcript variant 1, mRNA"
/protein_id="BAH13439.1"
/transl_table=1
/translation="MNLPSVPYLLPLEFPLGGGLTRMGFLEATGVLRIKEVCHHADCL
RLEDSWRELIDGHEKLTRRQCHQQEAVWELLHTEASYIRKLRVIINLFLCCLLNLQES
GLLCEVEAERLFSNIPEIAQLHRRLWASVMAPVLEKARRTRALLQPGDFLKGFKMFGS
LFKPYIRYCMEEEGCMEYMRGLLRDNDLFRAYITWAEKHPQCQRLKLSDMLAKPHQRL
TKYPLLLKSVLRKTEEPRAKEAVVAMIGSVERFIHHVNACMRQRQERQRLAAVVSRID
AYEVVESSSDEVDKLLKEFLHLDLTAPIPGASPEETRQLLLEGSLRMKEGKDSKMDVY
CFLFTDLLLVTKAVKKAERTRVIRPPLLVDKIVCRELRDPGSFLLIYLNEFHSAVGAY
TFQASGQALCRGWVDTIYNAQNQLQQLRAQEPPGSQQPLQSLEEEEDEQEEEEEEEEE
EEEGEDSGTSAASSPTIMRKSSGSPDSQHCASDGSTETLAMVVVEPGDTLSSPEFDSG
PFSSQSDETSLSTTASSATPTSELLPLGPVDGRSCSMDSAYGTLSPTSLQDFVAPGPM
AELVPRAPESPRVPSPPPSPRLRRRTPVQLLSCPPHLLKSKSEASLLQLLAGAGTHGT
PSAPSRSLSELCLAVPAPGIRTQGSPQEAGPSWDCRGAPSPGSGPGLVGCLAGEPAGS
HRKRCGDLPSGASPRVQPEPPPGVSAQHRKLTLAQLYRIRTTLLLNSTLTASEV"
BASE COUNT 442 a 740 c 734 g 395 t
ORIGIN
1 gatgttttat ttgaggctct cctgggtgct ggagcttctg agatgaattt gccatctgtc
61 ccctacctcc tgcccctgga gttcccactg ggaggagggc taaccaggat gggcttcctg
121 gaggcaactg gagtcctgag gattaaagag gtatgtcacc acgccgactg cctgaggctg
181 gaggacagct ggcgggagct cattgatggg catgagaagc tgacccggcg gcagtgccac
241 cagcaggagg cggtgtggga gctgctgcac acggaggcct cctacatcag gaaactgcgg
301 gtgatcatca acctgttcct gtgctgcctc ctgaacctgc aagagtcagg gctgctgtgt
361 gaggtggagg cggagcgcct gttcagcaac atcccggaga tcgcgcagct gcaccgcagg
421 ctgtgggcta gcgtgatggc gccggtgctg gagaaggcgc ggcgcacgcg agcgctgcta
481 cagcccgggg acttcctcaa aggcttcaag atgttcggct cgctcttcaa gccctacatc
541 cgctactgca tggaggagga gggctgcatg gagtacatgc gcggcctgct gcgcgacaac
601 gacctcttcc gggcctacat cacgtgggcg gagaagcacc cacagtgcca gaggctgaag
661 ctgagcgaca tgctggccaa accccaccag cggctcacca agtacccgct gctgctcaag
721 tcggtgctga ggaagaccga ggagccgcgc gccaaggagg ccgtcgtcgc catgatcggc
781 tccgtggagc gcttcatcca ccacgtgaac gcgtgcatgc ggcagcggca ggagcggcag
841 cggctggcgg ccgtggtgag ccgcatcgac gcctacgagg tggtggaaag cagcagcgac
901 gaagtggaca agctcctgaa ggaatttctg cacctggact tgacagcgcc catccctggc
961 gcctccccgg aggagacgcg gcagctgctg ctggagggga gcctgaggat gaaggagggg
1021 aaggacagca agatggatgt gtactgcttc ctcttcacgg atctgctgtt ggtgaccaaa
1081 gcagtgaaga aggcagagag gaccagggtc atcaggccac ccctgctcgt ggacaagatt
1141 gtgtgccggg agctacggga ccctgggtcc ttcctcctta tctacctgaa tgagtttcac
1201 agtgctgtag gggcctacac gttccaggcc agtggccagg ccttgtgccg tggctgggtg
1261 gacaccattt acaatgccca gaaccagctg caacagctgc gtgcacagga gcccccaggc
1321 agtcagcagc ccctgcagag cctggaagag gaggaggatg agcaggagga ggaagaggag
1381 gaggaggagg aggaggagga aggcgaggac agtggcactt cagctgccag ctcccctacc
1441 atcatgcgga aaagcagcgg cagccccgac tctcagcact gtgcctcaga tggctccacg
1501 gagaccctgg ccatggttgt ggtagagcct ggggacacgc tgtcctcccc cgagttcgac
1561 agcggtcctt tcagctccca gtctgatgag acctctctca gcaccactgc ctcatctgcc
1621 acgcccacca gtgagctgct gcccctgggt ccggtggacg gccgctcctg ctccatggac
1681 tctgcctacg gcaccctctc cccaacctcc ttacaagact ttgtggcccc aggcccaatg
1741 gcagagctag tgcctcgggc cccagagtcc ccacgagttc cttcccctcc accctcgccc
1801 cgtctccgcc gccgcacccc tgtccagctg ttgagctgcc cgccccacct gctcaagtct
1861 aagtccgagg ccagcctcct ccagctgctg gcaggggctg gcacccatgg gacaccctct
1921 gcccccagcc gcagcctgtc agagctctgc ctggctgttc cagccccagg tattaggact
1981 cagggctccc ctcaggaagc tgggcccagc tgggattgcc gaggggcccc tagccctggc
2041 agcggtcctg ggctagtcgg ctgcctggcc ggggaacctg caggctccca caggaagagg
2101 tgtggagacc tgccctcggg ggcctctccc agggtccagc ctgagccccc accaggggtc
2161 tctgcccagc acaggaagct gaccctggcc cagctctacc gaatcaggac caccctgctg
2221 cttaactcca cgctcactgc ctcggaggtc tgagcagagg gaggccccca agagtgccat
2281 tgaccaagag acagcagaca gcctgcctcc t
//