LOCUS AK301021 2632 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ58732 complete cds, highly similar to
Transportin-1.
ACCESSION AK301021
VERSION AK301021.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2632)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..2632
/clone="SPLEN1000078"
/clone_lib="SPLEN1"
/db_xref="H-InvDB:HIT000495645"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="spleen"
CDS 67..2613
/codon_start=1
/note="highly similar to Transportin-1"
/protein_id="BAG62638.1"
/transl_table=1
/translation="MVWDRQTKMEYEWKPDEQGLQQILQLLKESQSPDTTIQRTVQQK
LEQLNQYPDFNNYLIFVLTKLKSEGILITTIASKGELQNWPDLLPKLCSLLDSEDYNT
CEGAFGALQKICEDSAEILDSDVLDRPLNIMIPKFLQFFKHSSPKIRSHAVACVNQFI
ISRTQALMLHIDSFIENLFALAGDEEPEVRKNVCRALVMLLEVRMDRLLPHMHNIVEY
MLQRTQDQDENVALEACEFWLTLAEQPICKDVLVRHLPKLIPVLVNGMKYSDIDIILL
KGDVEEDETIPDSEQDIRPRFHRSRTVAQQHDEDGIEEEDDDDDEIDDDDTISDWNLR
KCSAAALDVLANVYRDELLPHILPLLKELLFHHEWVVKESGILVLGAIAEGCMQGMIP
YLPELIPHLIQCLSDKKALVRSITCWTLSRYAHWVVSQPPDTYLKPLMTELLKRILDS
NKRVQEAACSAFATLEEEACTELVPYLAYILDTLVFAFSKYQHKNLLILYDAIGTLAD
SVGHHLNKPEYIQMLMPPLIQKWNMLKDEDKDLFPLLECLSSVATALQSGFLPYCEPV
YQRCVNLVQKTLAQAMLNNAQPDQYEAPDKDFMIVALDLLSGLAEGLGGNIEQLVARS
NILTLMYQCMQDKMPEVRQSSFALLGDLTKACFQHVKPCIADFMPILGTNLNPEFISV
CNNATWAIGEISIQMGIEMQPYIPMVLHQLVEIINRPNTPKTLLENTAITIGRLGYVC
PQEVAPMLQQFIRPWCTSLRNIRDNEEKDSAFRGICTMISVNPSGVIQDFIFFCDAVA
SWINPKDDLRDMFCKILHGFKNQVGDENWRRLSDQFPLPLKERLAAFYGV"
BASE COUNT 765 a 545 c 580 g 742 t
ORIGIN
1 atttcaggcc ccggacagga ggcagtgccg cttcggccga aggcccgagc gcccgaggcg
61 tctgggatgg tgtgggaccg gcaaaccaag atggagtatg agtggaaacc tgacgagcaa
121 gggcttcagc aaatcctgca gctgttgaag gagtcccagt ccccagacac caccatccag
181 agaaccgtgc aacaaaaact ggaacaactt aatcagtatc cagactttaa caactacttg
241 atttttgttc ttacaaaatt aaaatctgaa ggtattttga tcacaactat agcctccaag
301 ggagaattgc agaattggcc tgacctctta ccaaaactct gtagcctgtt ggattctgaa
361 gattataata cctgtgaggg agcatttggt gcccttcaga agatttgtga agattctgct
421 gagattttag acagtgatgt tttagatcgt cctctcaaca tcatgattcc caaattttta
481 cagttcttca agcatagtag tccaaaaata aggtctcacg ctgttgcatg tgtcaatcag
541 tttatcatca gtaggactca agctctaatg ttgcacattg attcttttat tgagaatctc
601 tttgcattag ctggtgatga agaaccagag gtacggaaaa atgtgtgccg agcacttgtg
661 atgttgctcg aagttcgaat ggatcgcctg cttcctcaca tgcataatat agttgagtac
721 atgctacaga ggactcaaga tcaagatgaa aatgtggctt tagaagcctg tgaattttgg
781 ctaactttag ctgaacagcc aatatgcaaa gatgtactcg taaggcatct tcctaagttg
841 attcctgtgt tagtgaatgg catgaagtac tcagacatag atattatcct acttaagggt
901 gatgttgaag aagacgaaac gattcctgat agtgaacagg atatacggcc acgttttcac
961 cgatcgagga cggtggctca gcagcatgat gaagatggaa ttgaagagga agatgatgat
1021 gatgatgaaa ttgatgatga tgatacaatt tctgactgga atctaagaaa atgttctgct
1081 gctgccctgg atgttcttgc aaatgtgtat cgtgatgaac tgctgccaca tattttgccc
1141 cttttgaaag aattactttt tcatcatgaa tgggttgtta aagaatcagg cattttggtt
1201 ttaggagcaa ttgctgaagg ttgcatgcag ggcatgattc catacttgcc tgagcttatt
1261 cctcacctta ttcagtgcct ctctgataaa aaggctcttg tgcgttccat aacatgctgg
1321 actcttagcc gctatgcaca ctgggtggtc agccagccgc cagacacgta cctgaagcca
1381 ttaatgacag aattgctaaa gcgcatcctg gatagcaaca agagagtaca agaagctgcc
1441 tgcagtgcct ttgctaccct agaagaggag gcttgtacag aacttgttcc ttaccttgct
1501 tatatacttg ataccctggt ctttgcattt agtaaatacc agcataagaa cctgctcatt
1561 ctttacgatg ccataggaac attagcagat tcagtaggac atcatttaaa caaaccagaa
1621 tatattcaga tgctaatgcc tccactgatc cagaaatgga acatgttaaa ggatgaagat
1681 aaagatctct tccctttact tgagtgccta tcttcagttg ccacagcact gcagtctgga
1741 ttccttccgt actgtgaacc tgtgtatcag cgttgtgtaa acctagtaca gaagactctt
1801 gcacaagcca tgctaaacaa tgctcaacca gatcaatatg aagctccaga taaagatttt
1861 atgatagtgg ctcttgattt actgagtggc ctggctgaag gacttggagg caacattgaa
1921 cagctggtag cccgaagtaa catcctgaca ctaatgtatc agtgcatgca ggataaaatg
1981 ccagaagttc gacagagttc ttttgccctg ttaggtgacc tcacaaaagc ttgctttcag
2041 catgttaagc cttgtatagc tgatttcatg ccaatattgg gaaccaacct aaatccagaa
2101 ttcatttcag tctgcaacaa tgccacatgg gcaattggag aaatctccat tcaaatgggt
2161 atagagatgc agccttatat tcctatggtg ttgcaccagc ttgtagaaat cattaacaga
2221 cccaacacac caaagacgtt gttagagaat acagcaataa caattggtcg tcttggttac
2281 gtttgtcctc aagaggtggc ccccatgcta cagcagttta taagaccctg gtgcacctct
2341 ctgagaaaca taagagacaa tgaggaaaag gattcagcat tccgtggaat ttgtaccatg
2401 atcagtgtga atcccagtgg cgtaatccaa gattttatat ttttttgtga tgccgttgca
2461 tcatggatta acccaaaaga tgatctcaga gacatgttct gtaagatcct tcatggattt
2521 aaaaatcaag ttggcgatga aaattggagg cgtctctctg accagtttcc tcttccctta
2581 aaagagcgtc ttgcagcttt ttatggtgtt taatctaata cacttaagct gc
//