LOCUS AK301020 1926 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ53497 complete cds, highly similar to Meckel
syndrome type 1 protein.
ACCESSION AK301020
VERSION AK301020.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1926)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1926
/clone="SMINT2019108"
/clone_lib="SMINT2"
/db_xref="H-InvDB:HIT000495644"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="small intestine"
CDS 518..1588
/codon_start=1
/note="highly similar to Meckel syndrome type 1 protein"
/protein_id="BAG62637.1"
/transl_table=1
/translation="MHIMADLGPYKKLGYKKYEHVLCTLKVDSNGVITVKPDFTGLKG
PYRIETEGEKQELWKYTIDNVSPHAQPEEEERERRVFKDLYGRHKEYLSSLVGTDFEM
TVPGALRLFVNGEVVSAQGYEYDNLYVHFFVELPTAHWSSPAFQQLSGVTQTYTTKSL
AMDKVAHFSYPFTFEAFFLHEDESSDALPEWPVLYCEVLSLDFWQRYRVEGYGAVVLP
ATPGSHTLTVSTWRPVELGTVAELRRFFIGGSLELEDLSYVRIPGSFKGERLSRFGLR
TETTGTVTFRLHCLQQSRAFMESSSLQKRMRSVLDRLEGFSQQSSIHNVLEAFRRARR
RMQEARESLPQDLVSPSGTLVS"
BASE COUNT 443 a 529 c 528 g 426 t
ORIGIN
1 gctgtcatgg cggagaccgt ctggagcact gacaccgggg aggcagtgta tcgctcccgg
61 gaccccgtgc gcaacttgcg cctccgagtc cacctgcaaa gaatcacatc aagcaacttt
121 cttcattatc agcctgctgc cgagctcggg aaggacctca tagacttggc cacttttagg
181 cctcagccaa ctgccagtgg acaccgccca gaggaagacg aagaggagga gattgtgatt
241 gggtggcagg agaagctctt tagccagttt gaagtagatc tgtaccaaaa tgaaacagcc
301 tgtcagagtc ctttggatta tcagtaccgt caggagatcc tgaagctgga gaattcgggt
361 ggcaagaaaa accgacgaat ctttacctac actgactctg atagatacac caatttggag
421 gagggagggc ggcatcctca agtcacgcat cgtcacctgg gagccctcag aagagtttgt
481 caggaacaac cacgtcatta acacccctct tcagacaatg cacatcatgg cagacctggg
541 gccctataaa aagcttggct ataagaagta tgaacatgtc ctgtgtactc tgaaggtgga
601 tagcaatggt gtgatcacag taaagcctga cttcacgggc ctcaaaggac cctacaggat
661 tgagacggag ggggagaagc aggagctgtg gaaatatacg atcgacaatg tttcccccca
721 cgcacagccg gaggaggagg agcgggaacg gcgagtgttc aaggatcttt atggccggca
781 caaggagtat ctcagcagcc tcgtaggcac cgactttgag atgactgtcc caggtgccct
841 ccggctcttt gtaaatggag aggtcgtttc agcccaaggc tatgagtatg acaatctcta
901 cgtccacttc tttgtagaat tgccaactgc tcactggtca agcccagcat tccagcagct
961 ctcaggagta acacagacct acaccaccaa gtccctggca atggacaagg tggctcactt
1021 ctcctaccca ttcacgtttg aagccttctt cctccatgag gatgaatctt ctgatgcact
1081 cccggagtgg cctgtgctct actgtgaggt cctctcgctg gacttctggc agaggtaccg
1141 tgtggaaggc tatggggctg tggtgctgcc tgccactcca ggctcacaca ccctgacagt
1201 ctccacgtgg agacctgtgg agcttggcac ggtggctgag ctgaggaggt ttttcattgg
1261 cggttctctg gaactggagg acctctccta tgtacggata ccaggatcct tcaaggggga
1321 acgcctgagc cgctttggac tccgcacaga gaccacaggc actgtcacct tccgcttgca
1381 ctgtctgcag cagtccaggg ccttcatgga atcgagctcc cttcagaaaa ggatgcggag
1441 tgtgttggac cgtctggaag ggttcagcca gcagagttcc attcacaatg tgctagaggc
1501 cttccgtcga gcccggcgcc gcatgcagga ggcccgggaa agcctcccgc aggacctagt
1561 gagcccctct ggaaccctgg tctcctagct cacagcagcc ctggcccaca gtgcaagagg
1621 acaagatggg ggatatctga ggccagtgct ctcctgcctc ttcgtctttc tgattagaga
1681 ccacgttggt ctgctgagaa ccagaaaagc tgggaaattc ccggctggcc cctctgccta
1741 gccttctgca gggtcttctc cctaccctgt ggaaataaag ccagagaccc tgtggccccc
1801 cctttatatt tgcagccact gtcaatgggc atcacagcaa ggcaggcttt ttgatctgaa
1861 gctgtttggg gtgaccccat agtgagtctg gccttgactc acttttctgg cttgtctcac
1921 agtagc
//