LOCUS AK301017 986 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ51332 complete cds, highly similar to HLA
class II histocompatibility antigen, DMbeta chain precursor.
ACCESSION AK301017
VERSION AK301017.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 986)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..986
/clone="SMINT2018656"
/clone_lib="SMINT2"
/db_xref="H-InvDB:HIT000495641_02"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="small intestine"
CDS 171..491
/codon_start=1
/note="highly similar to HLA class II histocompatibility
antigen, DMbeta chain precursor"
/protein_id="BAG62634.1"
/transl_table=1
/translation="MAPCEFGVLNSLANVLSQHLNQKDTLMQRLRNGLQNCATHTQPF
WGSLTNRTRPPSVQVAKTTPFNTREPVMLACYVWGFYPAEVTITWRKNGKLVMPHSSA
HKTA"
BASE COUNT 250 a 215 c 284 g 237 t
ORIGIN
1 agatttaata tctaggggct gggtatcccc acatcactca tttggggggt caagggaccc
61 gggcaatata gtattctgct cagtgtctgg agatcatcta cccaggctgg ggcttctggg
121 acaggcgagg acccacggac cctggaagag ctggtccaga ggagaataag atggcccctt
181 gcgaatttgg ggtgctgaat agcttggcga atgtcctctc acagcacctc aaccaaaaag
241 acaccctgat gcagcgcttg cgcaatgggc ttcagaattg tgccacacac acccagccct
301 tctggggatc actgaccaac aggacacggc caccatctgt gcaagtagcc aaaaccactc
361 cttttaacac gagggagcct gtgatgctgg cctgctatgt gtggggcttc tatccagcag
421 aagtgactat cacgtggagg aagaacggga agcttgtcat gcctcacagc agtgcgcaca
481 agactgccta gcccaatgga gactggacat accagaccct ctcccattta gccttaaccc
541 cctcttacgg ggacacttgc acctgtgtgg tagagcacat tggggctcct gagcccatcc
601 ttcgggactg gagtaagtgt atggcagatg gatggaatta gggtcaaagc agagaaaatg
661 agatgtggat cgatacatgg tacatggtag acagcgaagt gctgaaaatg gggactgagt
721 ctggaggaac ttacgggggg cttaggacca gaatggggaa atgggataaa gaaatggaaa
781 tatttaggtt ggtgcaaagg taattgcagt ttttgccatt actttcagtg gcaaaaaccg
841 caattacttt tgcaccagtt taatatttag tctgtgctat tgctgctctg gtggtgtggt
901 tgatgttgct gcgtctatgt ttgagggtga gaggggagcg tgcttgcttt gaaatgagga
961 tgtagatttg gcaatcatat tttcag
//