LOCUS AK301004 2158 bp mRNA linear HUM 21-JAN-2009
DEFINITION Homo sapiens cDNA FLJ50239 complete cds, highly similar to
Arylsulfatase E precursor (EC 3.1.6.-).
ACCESSION AK301004
VERSION AK301004.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2158)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..2158
/clone="SMINT2017906"
/clone_lib="SMINT2"
/db_xref="H-InvDB:HIT000495628"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="small intestine"
CDS 293..2137
/codon_start=1
/note="highly similar to Arylsulfatase E precursor (EC
3.1.6.-)"
/protein_id="BAH13390.1"
/transl_table=1
/translation="MRPVINRCAPGSLDLMLPQAASEGIVFHSLQISLCFRSWLPAML
AVLLSLAPSASSDISASRPNILLLMADDLGIGDIGCYGNNTMRTPNIDRLAEAGVKLT
QHISAASLCTPSRAAFLTGRYPVRSGMVSSIGYRVLQWTGASGGLPTNETTFAKILKG
KGYATGLIGKWHLGLNCESASDHCHHPLHHGFDHFYGMPFSLMGDCARWELSEKRVNL
EQKLNFLFQVLALVALTLVAGKLTHLIPVSWMPVIWSALSAVLLLASSYFVGALIVHA
DCFLMRNHTITEQPMCFQRTTPLILQEVASFLKRNKHGPFLLFVSFLHVHIPLITMEN
FLGKSLHGLYGDNVEEMDWMVGRILDTLDVEGLSNSTLIYFTSDHGGSLENQLGNTQY
GGWNGIYKGGKGMGGWEGGIRVPGIFRWPGVLPAGRVIGEPTSLMDVFPTVVRLAGSE
VPQDRVIDGQDLLPLLLGTAQHSDHEFLMHYCERFLHAARWHQRDRGTMWKVHFVTPV
FQPEGAGACYGRKVCPCFGEKVVHHDPPLLFDLSRDPSETHILTPASEPVFYQVMERV
QQAVWEHQRTLSPVPLQLDRLGNIWRPWLQPCCGPFPLCWCLREDDPQ"
BASE COUNT 475 a 592 c 578 g 513 t
ORIGIN
1 cttttgggag agaaccttcc tcttcttgat cggggattca ggaaggagcc caggagcaga
61 ggaagtagag agagagacaa catgttacat ctgcaccatt cttgagacag ggtctcacca
121 tgttgcacaa gctggtctta aacacctggg ctcaggcgat gctcccacct tggcctccca
181 acgtgctcag ataatgggta tgagccacca cgcctgaccg cttctggatc tcttgatggt
241 gctttctcag aatgcactga tagtgattta tcctgcatct ggagaatgaa gcatgagacc
301 cgtgattaat agatgtgctc caggctccct tgatttgatg ttgccccagg cagcctcaga
361 aggaattgta tttcattctc tgcaaatcag tttgtgtttc aggagctggc tgccagcgat
421 gctcgctgta ctgctaagtt tggcaccatc agcttccagc gacatttccg cctcccgacc
481 gaacatcctt cttctgatgg cggacgacct tggcattggg gacattggct gctatggcaa
541 caacaccatg aggactccga atattgaccg ccttgcagag gccggcgtga agctgaccca
601 acacatctct gccgcatctt tgtgcacccc aagcagagcc gccttcctca cgggcagata
661 ccctgtgcga tcagggatgg tttccagcat tggttaccgt gttcttcagt ggaccggagc
721 atctggaggt cttccaacaa atgagacaac ttttgcaaaa atactgaaag ggaaaggcta
781 tgccactgga ctcattggaa aatggcatct gggtctcaac tgtgagtcag ccagtgatca
841 ttgccaccac cctctccatc atggctttga ccatttctac ggaatgcctt tctccttgat
901 gggtgattgc gcccgctggg aactctcaga gaagcgtgtc aacctggaac aaaaactcaa
961 cttcctcttc caagtcctgg ccttggttgc cctcacactg gtagcaggga agctcacaca
1021 cctgataccc gtctcgtgga tgccggtcat ctggtcagcc ctttcggccg tcctcctcct
1081 cgcaagctcc tattttgtgg gtgctctgat tgtccatgcc gattgctttc tgatgagaaa
1141 ccacaccatc acggagcagc ccatgtgctt ccaaagaacg acacccctta ttctgcagga
1201 ggttgcgtcc tttctcaaaa ggaataagca tgggcctttc ctcctctttg tttcctttct
1261 acacgttcac atccctctta tcactatgga gaacttcctc gggaagagtc tccacgggct
1321 gtatggggac aacgtagagg agatggactg gatggtagga cggatccttg acactttgga
1381 cgtggagggt ttgagcaaca gcaccctcat ttattttacg tcggatcacg gcggttccct
1441 agagaatcaa cttggaaaca cccagtatgg tggctggaat ggaatttata aaggtgggaa
1501 gggcatggga ggatgggaag gtgggatccg cgtgcccggg atcttccgct ggcccggggt
1561 gctcccggcc ggccgagtga ttggcgagcc cacgagtctg atggacgtgt tccccaccgt
1621 ggtccggctg gcgggcagcg aggtgcccca ggacagagtg attgacggcc aagaccttct
1681 gcccttgctc ctggggacag cccaacactc agaccacgag ttcctgatgc attattgtga
1741 gaggtttctg cacgcagcca ggtggcatca acgggacaga ggaacaatgt ggaaagtcca
1801 ctttgtgacg cctgtgttcc agccagaggg agccggtgcc tgctatggaa gaaaggtctg
1861 cccgtgcttt ggggaaaaag tagtccacca cgatccacct ttgctctttg acctctcaag
1921 agacccttct gagacccaca tcctcacacc agcctcagag cccgtgttct atcaggtgat
1981 ggaacgagtc cagcaggcgg tgtgggaaca ccagcggaca ctcagcccag ttcctctgca
2041 gctggacagg ctgggcaata tctggagacc gtggctgcag ccctgctgtg gcccgttccc
2101 cctctgctgg tgccttaggg aagatgaccc acaataaatg tctgcagtga aaagctgg
//