LOCUS AK301001 2204 bp mRNA linear HUM 24-JUL-2008 DEFINITION Homo sapiens cDNA FLJ53459 complete cds, highly similar to Cadherin-17 precursor. ACCESSION AK301001 VERSION AK301001.1 KEYWORDS FLI_CDNA; oligo capping. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2204) AUTHORS Isogai,T. and Yamamoto,J. TITLE Direct Submission JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases. Contact:Takao Isogai Reverse Proteomics Research Institute; 1-9-11 Kaji-cho, Chiyoda-ku, Tokyo 101-0044, Japan E-mail :flj-cdna@nifty.com REFERENCE 2 AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K., Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y., Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M., Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T. TITLE NEDO human cDNA sequencing project focused on splicing variants JOURNAL Unpublished (2007) COMMENT Human cDNA sequencing project focused on splicing variants of mRNA in NEDO functional analysis of protein and research application project supported by Ministry of Economy, Trade and Industry, Japan; cDNA selection for complete cds sequencing: Reverse Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan (Hitachi) and Japan Biological Informatics Consortium, Japan (JBIC); cDNA complete cds sequencing: JBIC; cDNA library construction: Helix Research Institute supported by Japan Key Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing: Research Association for Biotechnology, Japan, Biotechnology Center, National Institute of Technology and Evaluation, Japan and HRI; cDNA mapping to human genome: Central Research Laboratory, Hitachi; evaluation and annotation: REPRORI. FEATURES Location/Qualifiers source 1..2204 /clone="SMINT2017526" /clone_lib="SMINT2" /db_xref="H-InvDB:HIT000495625" /db_xref="taxon:9606" /mol_type="mRNA" /note="cloning vector: pME18SFL3" /organism="Homo sapiens" /tissue_type="small intestine" CDS 94..1836 /codon_start=1 /note="highly similar to Cadherin-17 precursor" /protein_id="BAG62620.1" /transl_table=1 /translation="MILQAHLHSLCLLMLYLATGYGQEGKFSGPLKPMTFSIYEGQEP SQIIFQFKANPPAVTFELTGETDNIFVIEREGLLYYNRALDRETRSTHNLQVAALDAN GIIVEGPVPITIEVKDINDNRPTFLQSKYEGSVRQNSRPGNSIGTLTAHDRDEENTAN SFLNYRIVEQTPKLPMDGLFLIQTYAGMLQLAKQSLKKQDTPQYNLTIEVSDKDFKTL CFVQINVIDINDQIPIFEKSDYGNLTLAEDTNIGSTILTIQATDADEPFTGSSKILYH IIKGDSEGRLGVDTDPHTNTGYVIIKKPLDFETAAVSNIVFKAENPEPLVFGVKYNAS SFAKFTLIVTDVNEAPQFSQHVFQAKVSEDVAIGTKVGNVTAKDPEGLDISYSLRGDT RGWLKIDHVTGEIFSVAPLDREAGSPYRVQVVATEVGGSSLSSVSEFHLILMDVNDNP PRLAKDYTGLFFCHPLSAPGSLIFEATDDDQHLFRGPHFTFSLGSGSLQNDWEVSKIN GTHARLSTRHTDFEERAYVVLIRINDGGRPPLEGIVSLPGIILAVVFIRIKKDKGKDN VESAQASEVKPLRS" BASE COUNT 628 a 491 c 487 g 598 t ORIGIN 1 agtcgtagca agagtctcga ccactgaatg gaagaaaagg acttttaacc accattttgt 61 gacttacaga aaggaatttg aataaagaaa actatgatac ttcaggccca tcttcactcc 121 ctgtgtcttc ttatgcttta tttggcaact ggatatggcc aagaggggaa gtttagtgga 181 cccctgaaac ccatgacatt ttctatttat gaaggccaag aaccgagtca aattatattc 241 cagtttaagg ccaatcctcc tgctgtgact tttgaactaa ctggggagac agacaacata 301 tttgtgatag aacgggaggg acttctgtat tacaacagag ccttggacag ggaaacaaga 361 tctactcaca atctccaggt tgcagccctg gacgctaatg gaattatagt ggagggtcca 421 gtccctatca ccatagaagt gaaggacatc aacgacaatc gacccacgtt tctccagtca 481 aagtacgaag gctcagtaag gcagaactct cgcccaggta acagtatcgg gacccttact 541 gcacatgaca gggatgaaga aaatactgcc aacagttttc taaactacag gattgtggag 601 caaactccca aacttcccat ggatggactc ttcctaatcc aaacctatgc tggaatgtta 661 cagttagcta aacagtcctt gaagaagcaa gatactcctc agtacaactt aacgatagag 721 gtgtctgaca aagatttcaa gaccctttgt tttgtgcaaa tcaacgttat tgatatcaat 781 gatcagatcc ccatctttga aaaatcagat tatggaaacc tgactcttgc tgaagacaca 841 aacattgggt ccaccatctt aaccatccag gccactgatg ctgatgagcc atttactggg 901 agttctaaaa ttctgtatca tatcataaag ggagacagtg agggacgcct gggggttgac 961 acagatcccc ataccaacac cggatatgtc ataattaaaa agcctcttga ttttgaaaca 1021 gcagctgttt ccaacattgt gttcaaagca gaaaatcctg agcctctagt gtttggtgtg 1081 aagtacaatg caagttcttt tgccaagttc acgcttattg tgacagatgt gaatgaagca 1141 cctcaatttt cccaacacgt attccaagcg aaagtcagtg aggatgtagc tataggcact 1201 aaagtgggca atgtgactgc caaggatcca gaaggtctgg acataagcta ttcactgagg 1261 ggagacacaa gaggttggct taaaattgac cacgtgactg gtgagatctt tagtgtggct 1321 ccattggaca gagaagccgg aagtccatat cgggtacaag tggtggccac agaagtaggg 1381 gggtcttcct taagctctgt gtcagagttc cacctgatcc ttatggatgt gaatgacaac 1441 cctcccaggc tagccaagga ctacacgggc ttgttcttct gccatcccct cagtgcacct 1501 ggaagtctca ttttcgaggc tactgatgat gatcagcact tatttcgggg tccccatttt 1561 acattttccc tcggcagtgg aagcttacaa aacgactggg aagtttccaa aatcaatggt 1621 actcatgccc gactgtctac caggcacaca gactttgagg agagggcgta tgtcgtcttg 1681 atccgcatca atgatggggg tcggccaccc ttggaaggca ttgtttcttt accaggtata 1741 attttagcag ttgtgtttat ccgcataaag aaggataaag gcaaagataa tgttgaaagt 1801 gctcaagcat ctgaagtcaa acctctgaga agctgaattt gaaaaggaat gtttgaattt 1861 atatagcaag tgctatttca gcaacaacca tctcatccta ttacttttca tctaacgtgc 1921 attataattt tttaaacaga tattccctct tgtcctttaa tatttgctaa atatttcttt 1981 tttgaggtgg agtcttgctc tgtcgcccag gctggagtac agtggtgtga tcccagctca 2041 ctgcaacctc cgcctcctgg gttcacatga ttctcctgcc tcagcttcct aagtagctgg 2101 gtttacaggc acccaccacc atgcccagct aatttttgta tttttaatag agacggggtt 2161 tcgccatttg gccaggctgg tcttgaactc ctgacgtcaa gtga //