LOCUS AK300991 2065 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ53522 complete cds, highly similar to Homo
sapiens mucin and cadherin-like (MUCDHL), transcript variant 3,
mRNA.
ACCESSION AK300991
VERSION AK300991.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2065)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..2065
/clone="SMINT2017072"
/clone_lib="SMINT2"
/db_xref="H-InvDB:HIT000495615"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="small intestine"
CDS 39..1973
/codon_start=1
/note="highly similar to Homo sapiens mucin and
cadherin-like (MUCDHL), transcript variant 3, mRNA"
/protein_id="BAG62610.1"
/transl_table=1
/translation="MGSWALLWPPLLFTGLLAQAQYCSVNKDIFEVEENTNVTEPLVD
IHVPEGQEVTLGALSTPFAFRIQGNQLFLNVTPDYEEKSLLEAQLLCQSGGTLVTQLR
VFVSVLDVNDNAPEFPFKTKEIRVEEDTKVNSTVIPETQLQAEDRDKDDILFYTLQEM
TAGASDYFSLVSVNRPALRLDRPLDFYERPNMTFWLLVRDTPGENVEPSHTATATLVL
NVVPADLRPPWFLPCTFSDGYVCIQAQYHGAVPTGHILPSPLVLRPGPIYAEDGDRGI
NQPIIYSIFRGNVNGTFIIHPDSGNLTVARSVPSPMTFLLLVKGQQADLARYSVTQVT
VEAVAAAGSPPRFPQRLYRGTVARGAGAGVVVKDAAAPSQPLRIQAQDPEFSDLNSAI
TYRITNHSHFRMEGEVVLTTTTLAQAGAFYAEVEAHNTVTSGTATTVIEIQVSEQEPP
STGGGPSEDKRFSVVDMAALGGVLGALLLLALLGLAVLVHKHYGPRLKCCSGKAPEPQ
PQGFDNQAFLPDHKANWAPVPSPTHDPKPAEAPMPAEPAPPGPASPGGAPEPPAAARA
GGSPTAVRSILTKERRPEGGYKAVWFGEDIGTEADVVVLNAPTLDVDGASDSGSGDEG
EGAGRGGGPYDAPGGDDSYI"
BASE COUNT 390 a 708 c 615 g 352 t
ORIGIN
1 acccgctcag accctcctgc caggtgacag ccgccaagat ggggtcttgg gccctgctgt
61 ggcctcccct gctgttcacc gggctgctcg cccaggccca gtactgctct gtgaacaagg
121 acatctttga agtagaggag aacacaaatg tcaccgagcc gctggtggac atccacgtcc
181 cggagggcca ggaggtgacc ctcggagcct tgtccacccc ctttgcattt cggatccagg
241 gaaaccagct gtttctcaac gtgactcctg attacgagga gaagtcactg cttgaggctc
301 agctgctgtg tcagagcgga ggcacattgg tgacccagct aagggtgttc gtgtcagtgc
361 tggacgtcaa tgacaatgcc cccgaattcc cctttaagac caaggagata agggtggagg
421 aggacacgaa agtgaactcc accgtcatcc ccgagacgca actgcaggct gaggaccgcg
481 acaaggacga cattctgttc tacaccctcc aggaaatgac agcaggtgcc agtgactact
541 tctccctggt gagtgtaaac cgtcccgccc tgaggctgga ccggcccctg gacttctacg
601 agcggccgaa catgaccttc tggctgctgg tgcgggacac tccgggggag aatgtggaac
661 ccagccacac tgccaccgcc acactagtgc tgaacgtggt gcccgccgac ctgcggcccc
721 cgtggttcct gccctgcacc ttctcagatg gctacgtctg cattcaagct cagtaccacg
781 gggctgtccc cacggggcac atactgccat ctcccctcgt cctgcgtccc ggacccatct
841 acgctgagga cggagaccgc ggcatcaacc agcccatcat ctacagcatc tttaggggaa
901 acgtgaatgg tacattcatc atccacccag actcgggcaa cctcaccgtg gccaggagtg
961 tccccagccc catgaccttc cttctgctgg tgaagggcca acaggccgac cttgcccgct
1021 actcagtgac ccaggtcacc gtggaggctg tggctgcggc cgggagcccg ccccgcttcc
1081 cccagagact gtatcgtggc accgtggcgc gtggcgctgg agcgggcgtt gtggtcaagg
1141 atgcagctgc cccttctcag cctctgagga tccaggctca ggacccggag ttctcggacc
1201 tcaactcggc catcacatat cgaattacca accactcaca cttccggatg gagggagagg
1261 ttgtgctgac caccaccaca ctggcacagg cgggagcctt ctacgcagag gttgaggccc
1321 acaacacggt gacctctggc accgcaacca cagtcattga gatacaagtt tccgaacagg
1381 agcccccctc cacaggtggc ggcccctcgg aggacaagcg cttctcggtg gtggatatgg
1441 cggccctggg cggggtgctg ggtgcgctgc tgctgctggc tctccttggc ctcgccgtcc
1501 ttgtccacaa gcactatggc ccccggctca agtgctgctc tggcaaagct ccggagcccc
1561 agccccaagg ctttgacaac caggcgttcc tccctgacca caaggccaac tgggcgcccg
1621 tccccagccc cacgcacgac cccaagcccg cggaggcacc gatgcccgca gagcccgcac
1681 cccccggccc tgcctcccca ggcggtgccc ctgagccccc cgcagcggcc cgagctggcg
1741 gaagccccac ggcggtgagg tccatcctga ccaaggagcg gcggccggag ggcgggtaca
1801 aggctgtctg gtttggcgag gacatcggga cggaggcaga cgtggtcgtt ctcaacgcgc
1861 ccaccctgga cgtggatggc gccagtgact ccggcagcgg cgatgagggc gagggcgcgg
1921 ggaggggtgg gggtccctac gatgcgcccg gtggtgatga ctcctacatc taagtggccc
1981 ctccaccctc tcccccagcc gcacgggcac tggaggtctc gctcccccag cctccgaccc
2041 gaggcagaat aaagcaaggc tcccg
//