LOCUS AK300936 1817 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ51329 complete cds, highly similar to
Harmonin.
ACCESSION AK300936
VERSION AK300936.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1817)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1817
/clone="SMINT2012127"
/clone_lib="SMINT2"
/db_xref="H-InvDB:HIT000495560"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="small intestine"
CDS 73..1527
/codon_start=1
/note="highly similar to Harmonin"
/protein_id="BAG62565.1"
/transl_table=1
/translation="MDRKVAREFRHKVDFLIENDAEKDYLYDVLRMYHQTMDVAVLVG
DLKLVIKGGQADSVGLQVGDEIVRINGYSISSCTHEEVINLIRTKKTVSIKVRHIGLI
PVKSSPDEPLTWQYVDQFVSESGGVRGSLGSPGNRENKEKKVFISLVGSRGLGCSISS
GPIQKPGIFISHVKPGSLSAEVGLEIGDQIVEVNGVDFSNLDHKEAVNVLKSSRSLTI
SIVAAAGRELFMTDRERLAEARQRELQRQELLMQKRLAMESNKILQEQQEMERQRRKE
IAQKAAEENERYRKEMEQIVEEEEKFKKQWEEDWGSKEQLLLPKTITAEVHPVPLRKP
KYDQGVEPELEPADDLDGGTEEQGEQDFRKYEEGFDPYSMFTPEQIMGKDVRLLRIKK
EGSLDLALEGGVDSPIGKVVVSAVYERGAAERHGGIVKGDEIMAINGKIVTDYTLAEA
DAALQKAWNQGGDWIDLVVAVCPPKEYDDELTFF"
BASE COUNT 467 a 456 c 555 g 339 t
ORIGIN
1 ctttccagct cctggcagcc gggcacccga aggaacgggt cgtgcaacga cgcagctgga
61 cctggcccag ccatggaccg aaaagtggcc cgagaattcc ggcataaggt ggattttctg
121 attgaaaatg atgcagagaa ggactatctc tatgatgtgc tgcgaatgta ccaccagacc
181 atggacgtgg ccgtgctcgt gggagacctg aagctggtca tcaaaggcgg tcaggcagac
241 agcgtcgggc tccaggtagg ggacgagatc gtccggatca atggatattc catctcctcc
301 tgtacccatg aggaggtcat caacctcatt cgaaccaaga aaactgtgtc catcaaagtg
361 agacacatcg gcctgatccc cgtgaaaagc tctcctgatg agcccctcac ttggcagtat
421 gtggatcagt ttgtgtcgga atctgggggc gtgcgaggca gcctgggctc ccctggaaat
481 cgggaaaaca aggagaagaa ggtcttcatc agcctggtag gctcccgagg ccttggctgc
541 agcatttcca gcggccccat ccagaagcct ggcatcttta tcagccatgt gaaacctggc
601 tccctgtctg ctgaggtggg attggagata ggggaccaga ttgtcgaagt caatggcgtc
661 gacttctcta acctggatca caaggaggct gtaaatgtgc tgaagagtag ccgcagcctg
721 accatctcca ttgtagctgc agctggccgg gagctgttca tgacagaccg ggagcggctg
781 gcagaggcgc ggcagcgtga gctgcagcgg caggagcttc tcatgcagaa gcggctggcg
841 atggagtcca acaagatcct ccaggagcag caggagatgg agcggcaaag gagaaaagaa
901 attgcccaga aggcagcaga ggaaaatgag agataccgga aggagatgga acagattgta
961 gaggaggaag agaagtttaa gaagcaatgg gaagaagact ggggctcaaa ggaacagcta
1021 ctcttgccta aaaccatcac tgctgaggta cacccagtac cccttcgcaa gccaaagtat
1081 gatcagggag tggaacctga gctcgagccc gcagatgacc tggatggagg cacggaggag
1141 cagggagagc aggatttccg gaaatatgag gaaggctttg acccctactc tatgttcacc
1201 ccagagcaga tcatggggaa ggatgtccgg ctcctacgca tcaagaagga gggatcctta
1261 gacctggccc tggaaggcgg tgtggactcc cccattggga aggtggttgt ttctgctgtg
1321 tatgagcggg gagctgctga gcggcatggt ggcattgtga aaggggacga gatcatggca
1381 atcaacggca agattgtgac agactacacc ctggctgagg ctgacgctgc cctgcagaag
1441 gcctggaatc agggcgggga ctggatcgac cttgtggttg ccgtctgccc cccaaaggag
1501 tatgacgatg agctgacctt cttctgaagt ccaaaagggg aaaccaaatt caccgttagg
1561 aaacagtgag ctccggcccc acctcgtgaa cacaaagcct cggatcagcc ttgagagagg
1621 ccacactaca cacaccagat ggcatccttg ggacctgaat ctatcaccca ggaatctcaa
1681 actccctttg gccctgaacc agggccagat aaggaacagc tcgggccact cttctgaagg
1741 ccaacgtgga ggaaagggag cagccagcca tttgggagaa gatctcaagg atccagactc
1801 tcattccttt cctctgg
//