LOCUS AK300897 1446 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ55860 complete cds, highly similar to Homo
sapiens growth hormone regulated TBC protein 1 (GRTP1), mRNA.
ACCESSION AK300897
VERSION AK300897.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1446)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1446
/clone="SMINT2007831"
/clone_lib="SMINT2"
/db_xref="H-InvDB:HIT000495521"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="small intestine"
CDS 48..1082
/codon_start=1
/note="highly similar to Homo sapiens growth hormone
regulated TBC protein 1 (GRTP1), mRNA"
/protein_id="BAG62536.1"
/transl_table=1
/translation="MQPAERSRVPRIDPYGFERPEDFDDAAYEKFFSSYLVTLTRRAI
KWSRLLQGGGVPRSRTVKRYVRKGVPLEHRARVWMVLSGAQAQMDQNPGYYHQLLQGE
RNPRLEDAIRTDLNRTFPDDVKFRKTTDPCLQRTLYNVLLAYGHHNQGVGYCQGMNFI
AGYLILITNNEEESFWLLDALVGRILPDYYSPAMLGLKTDQEVLGELVRAKLPAVGAL
MERLGVLWTLLVSRWFICLFVDILPVETVLRIWDCLFNEGSKIIFRVALTLIKQHQEL
ILEATSVPDICDKFKQITKGSFVMECHTFMQVCGAARGSVPSQGAPPHLQPGGCSDHP
EGAQDGHQWA"
BASE COUNT 269 a 416 c 465 g 296 t
ORIGIN
1 gaacttggga cccgctggcc tcgctcggtg cgcgcctccc tccccgcatg cagcccgccg
61 agcgctcgcg ggtccccagg atcgacccgt acggattcga gcggcctgag gacttcgacg
121 acgccgccta cgagaagttt ttctccagct acctggtcac gctcacccgc agggcgatca
181 aatggtcccg gctgctgcag ggcgggggcg tccccaggag ccggacagtg aagcgctatg
241 tccggaaagg ggtcccgctg gagcaccgtg cccgcgtctg gatggtgctg agtggggccc
301 aggcgcagat ggaccagaat cccggctact accaccagct tctccaggga gagagaaacc
361 ccaggctgga ggacgccatc aggacagacc tgaaccggac cttccccgac gacgtgaagt
421 tccggaagac cacggacccc tgcttacaga ggaccctgta caatgtgctg ctggcatatg
481 ggcaccataa ccagggagtg ggctactgcc agggaatgaa ttttatagca ggatatctga
541 ttcttataac aaataatgaa gaagaatctt tttggctgtt agatgctctt gttggaagaa
601 tactaccaga ttactacagc ccggccatgc tgggcctgaa gaccgaccag gaggtcctcg
661 gggagctggt gcgggcgaag ctgccggctg tgggggccct gatggagcgt ctcggtgtgc
721 tgtggacgct gctggtgtcc cgctggttca tctgcctgtt tgtggacatc ttgcccgtgg
781 agacagtgct tcggatctgg gactgtttgt ttaacgaagg ctcgaagatt atcttccggg
841 tggccctgac cttaattaag cagcaccagg agttgatttt ggaagccacc agcgttccag
901 acatttgcga taagtttaag cagataacca aagggagttt cgtgatggag tgtcacacgt
961 ttatgcaggt gtgtggggct gcacgtggct cagtcccctc ccagggggcc ccgcctcacc
1021 tgcagcccgg gggctgctct gaccacccgg agggtgcaca ggacgggcac cagtgggcat
1081 agggcacagg atgagcctcc agctctgtcc tgcatctgcc ccctgcgcct ggcctccgag
1141 ggctttcctg tctatgacgg ccctgtcttc ttggccctgg cactgcggac gctgctcctg
1201 gtcctaatgg ctgtactcat ctgctgtgtg tggtgccaga agtgcggctt cccgaggccc
1261 ggcctcccca ctgggtcctg gacctggcgc aggccgtata gactcaggtc ctgatgaggg
1321 cgttgtggga gctgtacctg acaggccttc tgaggaagcc aagacgccag gagaggctca
1381 ggcctgggag tcagtagttt cctaagaggg agtggaggct cggggccact ctgggtgcag
1441 catggc
//