LOCUS AK300868 2208 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ56552 complete cds, highly similar to Signal
transducer and activator oftranscription 4.
ACCESSION AK300868
VERSION AK300868.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2208)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..2208
/clone="SMINT2004708"
/clone_lib="SMINT2"
/db_xref="H-InvDB:HIT000495492"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="small intestine"
CDS 69..2117
/codon_start=1
/note="highly similar to Signal transducer and activator
oftranscription 4"
/protein_id="BAG62516.1"
/transl_table=1
/translation="MSQWNQVQQLEIKFLEQVDQFYDDNFPMEIRHLLAQWIENQDWE
AASNNETMATILLQNLLIQLDEQLGRVSKEKNLLLIHNLKRIRKVLQGKFHGNPMHVA
VVISNCLREERRILAAANMPVQGPLEKSLQSSSVSERQRNVEHKVAAIKNSVQMTEQD
TKYLEDLQDEFDYRYKTIQTMDQSDKNSAMVNQEVLTLQEMLNSLDFKRKEALSKMTQ
IIHETDLLMNTMLIEELQDWKRRQQIACIGGPLHNGLDQLQNCFTLLAESLFQLRRQL
EKLEEQSTKMTYEGDPIPMQRTHMLERVTFLIYNLFKNSFVVERQPCMPTHPQRPLVL
KTLIQFTVKLRLLIKLPELNYQVKVKASIDKNVSTLSNRRFVLCGTNVKAMSIEESSN
GSLSVEFRHLQPKEMKSSAGGKGNEGCHMVTEELHSITFEAQICLYGLTIDLETSSLP
VVMISNVSQLPNAWASIIWYNVSTNDSQNLVFFNNPPPATLSQLLEVMSWQFSSYVGR
GLNSDQLHMLAEKLTVQSSYSDGHLTWAKFCKEHLPGKSFTFWTWLEAILDLIKKHIL
PLWIDGYVMGFVSKEKERLLLKDKMPGTFLLRFSESHLGGITFTWVDHSESGEVRFHS
VEPYNKGRLSALPFADILRDYKVIMAENIPENPLKYLYPDIPKDKAFGKHYSSQPCEG
"
BASE COUNT 681 a 459 c 483 g 585 t
ORIGIN
1 gactgtgagg ggcgcttctg actttggact tgagcactgc ctgggacctg tgctgagaga
61 gcgctagcat gtctcagtgg aatcaagtcc aacagttaga aatcaaattt ttggagcagg
121 tggatcaatt ctatgatgac aactttccca tggaaattcg gcatctgttg gcccaatgga
181 ttgaaaatca agactgggag gcagcttcta acaatgaaac catggcaacg attcttcttc
241 aaaacttgtt aatacaactg gatgaacagt taggtcgtgt ttccaaagag aaaaacctac
301 tcttgataca caatctaaaa agaattagga aggtccttca gggaaaattt catggaaatc
361 caatgcatgt agctgtggtt atttcaaact gtttaaggga agagaggaga atattggctg
421 cagccaacat gcctgtccag gggcctctag agaaatcctt acaaagttct tcagtttcag
481 aaagacagag gaatgtggag cacaaagtgg ctgccattaa aaacagtgtg cagatgacag
541 aacaagatac caaatactta gaagatctgc aagacgaatt tgactacagg tataaaacaa
601 ttcagacaat ggatcagagt gacaagaata gtgccatggt gaatcaggaa gttttgacac
661 tgcaggaaat gcttaacagc ctcgatttca agagaaagga ggctctcagt aaaatgaccc
721 aaatcatcca tgagacagac ctgttaatga acaccatgct catagaagag ctgcaagact
781 ggaagcggcg gcagcaaatc gcctgcatcg ggggtccact ccacaatggg ctcgaccagc
841 ttcagaactg ctttacacta ttggcagaaa gtcttttcca actgagaagg caattggaga
901 aactagagga gcaatctacc aaaatgacat atgaaggtga tcccattcca atgcaaagaa
961 ctcacatgct agaaagagtc accttcttga tctacaacct tttcaagaac tcatttgtgg
1021 ttgagcgaca gccatgtatg ccaacccacc ctcagaggcc gttggtactt aaaaccctaa
1081 ttcagttcac tgtaaaacta aggctactaa taaaattgcc agaactaaac tatcaggtaa
1141 aggttaaggc atcaattgac aagaatgttt caactctaag caaccgaaga tttgtacttt
1201 gtggaactaa tgtcaaagcc atgtctattg aagaatcttc caatgggagt ctctcagtag
1261 aatttcgaca tttgcaacca aaggaaatga agtccagtgc tggaggtaaa ggaaatgagg
1321 gctgtcacat ggtgactgaa gaacttcatt ccataacgtt tgaagcacag atctgcctct
1381 atggcctgac catagatttg gagaccagct cattgcctgt ggtgatgatt tccaatgtca
1441 gtcagttacc taatgcttgg gcatccatca tttggtacaa cgtgtcaacc aacgattccc
1501 agaacttggt tttctttaat aatcctccac ctgccacatt gagtcaacta ctggaggtga
1561 tgagctggca gttttcatcg tacgttggtc gtggtcttaa ctcagatcaa ctccatatgc
1621 tggcagagaa gcttacagtc caatctagct acagtgatgg tcacctcacc tgggccaagt
1681 tctgcaagga acatttacct ggtaaatcat ttaccttttg gacatggctt gaagcaatat
1741 tggatctaat taagaaacac attcttcccc tttggattga tgggtatgtc atgggctttg
1801 ttagcaaaga gaaggaacgg ctgttgctaa aggataaaat gcctggcacc tttttattaa
1861 gattcagtga aagccatctc ggaggaataa ctttcacctg ggtggaccat tctgaaagtg
1921 gggaagtgag attccactct gtagaaccct acaataaagg ccggttgtct gctctgccat
1981 tcgctgacat cctgcgagac tacaaagtta ttatggctga aaacattcct gaaaaccctc
2041 tgaagtacct atatcctgac attcccaaag acaaagcctt cggtaaacac tacagctctc
2101 agccttgcga aggttaggtt tttctgtttg tttttgtttt tttttcctta agattttgga
2161 aaataacctc atattggagc aaagtaaatg aagttcccct tcttgttt
//