LOCUS AK300856 2047 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ60168 complete cds, highly similar to
Homeobox protein Nkx-2.3.
ACCESSION AK300856
VERSION AK300856.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2047)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..2047
/clone="SMINT2003387"
/clone_lib="SMINT2"
/db_xref="H-InvDB:HIT000495480"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="small intestine"
CDS 152..1246
/codon_start=1
/note="highly similar to Homeobox protein Nkx-2.3"
/protein_id="BAG62506.1"
/transl_table=1
/translation="MMLPSPVTSTPFSVKDILNLEQQHQHFHGAHLQADLEHHFHSAP
CMLAAAEGTQFSDGGEEDEEDEGEKLSYLNSLAAADGHGDSGLCPQGYVHTVLRDSCS
EPKEHEEEPEVVRDRSQKSCQLKKSLETAGDCKAAEESERPKPRSRRKPRVLFSQAQV
FELERRFKQQRYLSAPEREHLASSLKLTSTQVKIWFQNRRYKCKRQRQDKSLELGAHA
PPPPPRRVAVPVLVRDGKPCVTPSAQAYGAPYSVGASAYSYNSFPAYGYGNSAAAAAA
AAAAAAAAAAYSSSYGCAYPAGGGGGGGGTSAATTAMQPACSAAGGGPFVNVSNLGGF
GSGGSAQPLHQGTAAGAACAQGTLQGIRAW"
BASE COUNT 417 a 630 c 669 g 331 t
ORIGIN
1 atggaggcga tttagactgg agtgggaccg cgtctgtcaa aagcccgact cggcagcagc
61 ggcggagtcc aggaggagag ctggagccgc cgcgctgcct ccccgccccc gccgggattt
121 attatttgga ctggacaatt aagtggccct gatgatgtta ccaagcccgg tcacctccac
181 ccctttctca gtcaaagaca ttttgaatct ggagcagcag caccagcact tccatggtgc
241 gcacttgcag gcggacttgg agcaccactt ccactctgcg ccctgcatgc tggccgcagc
301 tgaggggacg caattttctg acggagggga ggaggacgag gaagacgagg gcgagaaatt
361 gtcctatttg aactcactag ccgcagcaga cggccacggg gattcagggc tgtgtcccca
421 gggctatgtc cacacggtcc tgcgagactc gtgcagcgag cccaaggaac atgaagagga
481 gcccgaggtc gtgagggacc ggagccaaaa aagctgccag ctgaagaagt ctctagagac
541 ggccggagac tgcaaggcgg cggaggagag cgagaggccg aagccacgca gccgccggaa
601 gccccgggtc ctcttctcgc aagcccaggt cttcgagctg gaacgcaggt tcaagcagca
661 gcggtacctg tcggcacccg agcgcgagca cctcgccagc agcctgaagc tcacatccac
721 tcaggtgaaa atctggttcc agaatcgcag gtacaagtgc aagagacagc ggcaggacaa
781 gtctctggag cttggcgcac acgcgccccc gccgccgccg cgccgcgtgg ctgtcccggt
841 gctggtgcgg gacggcaagc cgtgcgtcac gcccagcgcg caggcctacg gcgcgcccta
901 cagcgtgggc gccagcgcct actcctacaa cagcttcccc gcctacggct atgggaactc
961 ggccgcggcc gccgccgccg ccgccgccgc cgccgcagca gcggcggcct acagcagcag
1021 ctatggctgt gcgtacccgg cgggcggcgg cggcggcggc ggcgggacct ccgcggcgac
1081 cactgccatg cagcccgcct gcagcgcggc cggaggcggc ccctttgtga acgtgagcaa
1141 cctaggaggc ttcggcagcg gcggcagcgc acagccgttg caccagggta ctgcagccgg
1201 ggccgcgtgc gctcagggca ccttgcaggg catccgggcc tggtagggac ggggcgggtc
1261 acgcggcggg caccccagcg cagcctggcg ccgcgggact gaagctcgag aagggcctga
1321 cctaaaggtc aggtcccctc gttaaaaaaa tatgtacgtc tagctcctca gggcttcgga
1381 tcgcagctca ctcgaggcct ggggaagggg actcaggggc gaaggaggat gactgggtcc
1441 ggtcgccagg actgtctctg aggcagaaac gctggctggg cgccggggag gacgatggcc
1501 ccgaccctgg cagcgagagg agaccaggag gctaggaccc tggccgcgct tggttcttcc
1561 aaagcgagaa gggcttctct ccctctgcct ttccgcggcc tccgcgaagc gttggcgggg
1621 agcccaagga cgtaacaaat taaaagcatg aaggagagaa aaatgggggt cgtggcttga
1681 gaaattccag gccctaccga tcctctgccc cctttgcggg cctggagcgc catagcacag
1741 tcgatttcgt ttcgcagctg tctcccctcc gcagcagata cctcggtcca gatctccgga
1801 ttgtcggggg acgcaggact cttcgaggaa aaccagccga atgagatcaa aagttggggg
1861 tggggggagg ctgaacaaac tcaggacctg gtggcccacc ggaggtgtta ccgggtttcc
1921 tttctgtttc gtattctgta ttcagcacat gttatctatc tatctatcta tataactata
1981 accacacgcc gtgtagacac ccgctgccac acactacagg agtcaataaa caaggtgcaa
2041 tattttc
//