LOCUS AK300847 1505 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ54652 complete cds, highly similar to Homo
sapiens podocan (PODN), mRNA.
ACCESSION AK300847
VERSION AK300847.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1505)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1505
/clone="SMINT2002370"
/clone_lib="SMINT2"
/db_xref="H-InvDB:HIT000495471"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="small intestine"
CDS 12..1094
/codon_start=1
/note="highly similar to Homo sapiens podocan (PODN),
mRNA"
/protein_id="BAG62498.1"
/transl_table=1
/translation="MEGARARGAQLRLGERVRPVGRRSAPGRSRFHQPWRPGASDSAP
PAGTMAQSRVLLLLLLLHLEKSAIRSVDANVLTPIRSLEYLLLHSNQLREQGIHPLAF
QGLKRLHTVHLYNNALERVPSGLPRRVRTLMILHNQITGIGREDFATTYFLEELNLSY
NRITSPQVHRDAFRKLRLLRSLDLSGNRLHTLPPGLLRNVHVLKVKRNELAALARGAL
AGMAQLRELYLTSNRLRSRALGPRAWVDLAHLQLLDIAGNQLTEIPEGLPESLEYLYL
QNNKISAVPANAFDSTPNLKGIFLRFNKLAVGSVVDSAFRRLKHLQVLDIEGNLEFGD
ISKDRGRLGKEKEEEEEEEEEEEETR"
BASE COUNT 315 a 517 c 424 g 249 t
ORIGIN
1 gcttgacttg aatggaagga gcccgagccc gcggagcgca gctgagactg ggggagcgcg
61 ttcggcctgt ggggcgccgc tcggcgccgg ggcgcagcag gttccatcag ccctggcgcc
121 caggcgcatc tgactcggca ccccctgcag gcaccatggc ccagagccgg gtgctgctgc
181 tcctgctgct gctgcacttg gagaagagcg ccatccggag cgtggacgcg aatgtgctga
241 cccccatccg cagcctggag tacctgctgc tgcacagcaa ccagctgcgg gagcagggca
301 tccacccact ggccttccag ggcctcaagc ggttgcacac ggtgcacctg tacaacaacg
361 cgctggagcg cgtgcctagt ggcctgcctc gccgcgtgcg caccctcatg atcctgcaca
421 accagatcac aggcattggc cgcgaagact ttgccaccac ctacttcctg gaggagctca
481 acctcagcta caaccgcatc accagcccac aggtgcaccg cgacgccttc cgcaagctgc
541 gcctgctgcg ctcgctggac ctgtcgggca accggctgca cacgctgcca cctgggctgc
601 ttcgaaatgt ccatgtgctg aaggtcaagc gcaatgagct ggctgccttg gcacgagggg
661 cgctggcggg catggctcag ctgcgtgagc tgtacctcac cagcaaccga ctgcgcagcc
721 gagccctggg cccccgtgcc tgggtggacc tcgcccatct gcagctgctg gacatcgccg
781 ggaatcagct cacagagatc cccgaggggc tccccgagtc acttgagtac ctgtacctgc
841 agaacaacaa gattagtgcg gtgcccgcca atgccttcga ctccacgccc aacctcaagg
901 ggatctttct caggtttaac aagctggctg tgggctccgt ggtggacagt gccttccgga
961 ggctgaagca cctgcaggtc ttggacattg aaggcaactt agagtttggt gacatttcca
1021 aggaccgtgg ccgcttgggg aaggaaaagg aggaggagga agaggaggag gaggaggaag
1081 aggaaacaag atagtgacaa ggtgatgcag atgtgaccta ggatgatgga ccgccggact
1141 cttttctgca gcacacgcct gtgtgctgtg agccccccac tctgccgtgc tcacacagac
1201 acacccagct gcacacatga ggcatcccac atgacacggg ctgacacagt ctcatatccc
1261 caccccttcc cacggcgtgt cccacggcca gacacatgca cacacatcac accctcaaac
1321 acccagctca gccacacaca actaccctcc aaaccaccac agtctctgtc acacccccac
1381 taccgctgcc acgccctctg aatcatgcag ggaagggtct gcccctgccc tggcacacac
1441 aggcacccat tccctccccc tgctgacatg tgtatgcgta tgcatacaca ccacacacac
1501 acaca
//