LOCUS AK300797 1185 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ61418 complete cds, highly similar to DnaJ
homolog subfamily C member 8.
ACCESSION AK300797
VERSION AK300797.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1185)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1185
/cell_line="SK-N-SH"
/cell_type="neuroblastoma"
/clone="SKNSH1000379"
/clone_lib="SKNSH1"
/db_xref="H-InvDB:HIT000495421"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
CDS 23..784
/codon_start=1
/note="highly similar to DnaJ homolog subfamily C member
8"
/protein_id="BAG62456.1"
/transl_table=1
/translation="MAASGESGTSGGGGSTEEAFMTFYSEVKQIEKRDSVLTSKNQIE
RLTRPGSSYFNLNPFEVLQIDPEVTDEEIKKRFRQLSILVHPDKNQDDADRAQKAFEA
VDKAYKLLLDQEQKKRALDVIQAGKEYVEHTVKERKKQLKKEGKPTIVEEDDPELFKQ
AVYKQTMKLFAELEIKRKEREAKEMHERKRQREEEIEAQEKAKREREWQKNFEESRDG
RVDSWRNFQANTKGKKEKKNRTFLRPPKVKMEQRE"
BASE COUNT 397 a 231 c 288 g 269 t
ORIGIN
1 acgtggtggc tgggccgggg aaatggcggc ttcaggagag agcgggactt caggcggcgg
61 aggcagcacc gaggaagcat ttatgacctt ctacagtgag gtgaaacaaa tagagaagag
121 agactcggtt ctaacttcga aaaatcagat tgaaagactg acccgtcctg gttcctctta
181 cttcaatttg aacccatttg aggttcttca gatagatcct gaagttacag atgaagaaat
241 aaaaaagagg tttcggcagt tatccatctt ggtgcatcct gacaaaaatc aagatgatgc
301 tgacagagca caaaaggctt ttgaagctgt ggacaaagct tacaagttgc tactggatca
361 ggagcaaaag aagagggccc tggatgtaat tcaggcagga aaagaatacg tggaacacac
421 tgtgaaagag cgaaaaaaac aattaaagaa ggaaggaaaa cctacaattg tagaggagga
481 tgatcctgag ctgttcaaac aagctgtata taaacagaca atgaaactct ttgcagagct
541 ggaaattaaa aggaaagaga gagaagccaa agagatgcat gaaaggaaac gacaaaggga
601 agaagagatt gaagctcaag aaaaagccaa acgggaaaga gagtggcaga aaaactttga
661 ggaaagtcga gatggtcgtg tggacagctg gcgaaacttc caagccaata cgaaggggaa
721 gaaagagaag aaaaatcgga ccttcctgag accaccgaaa gtaaaaatgg agcaacgtga
781 gtgaccgccc aaggtcacag gcacagaacc tttcccctgc tatctccctt cctgcttcga
841 aggactcatt ctttcctccc acttccaccc caacatagag tagtatttgc tttttagtcc
901 attttgtttt caatacgatt taatatcgat cagagtaatt cttttgtaca ttgaaatgag
961 gggcttggtt taaaaaaaga cctttccctc tccctgcccc tagaacaacc agtattagaa
1021 ggtgccacca ttggtgctgc cttctcttcc cacagcctgt aactcagtgt tttgtacttc
1081 actgaattgt gatggttaga aacttcgtgg atagtttgtg gaaatcatcc aattaaacat
1141 actgcttaaa acagtgttgc tgtgacttca gagacaagcc tggaa
//