LOCUS AK300779 1460 bp mRNA linear HUM 24-JUL-2008 DEFINITION Homo sapiens cDNA FLJ52688 complete cds, highly similar to SET and MYND domain-containing protein 5. ACCESSION AK300779 VERSION AK300779.1 KEYWORDS FLI_CDNA; oligo capping. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1460) AUTHORS Isogai,T. and Yamamoto,J. TITLE Direct Submission JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases. Contact:Takao Isogai Reverse Proteomics Research Institute; 1-9-11 Kaji-cho, Chiyoda-ku, Tokyo 101-0044, Japan E-mail :flj-cdna@nifty.com REFERENCE 2 AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K., Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y., Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M., Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T. TITLE NEDO human cDNA sequencing project focused on splicing variants JOURNAL Unpublished (2007) COMMENT Human cDNA sequencing project focused on splicing variants of mRNA in NEDO functional analysis of protein and research application project supported by Ministry of Economy, Trade and Industry, Japan; cDNA selection for complete cds sequencing: Reverse Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan (Hitachi) and Japan Biological Informatics Consortium, Japan (JBIC); cDNA complete cds sequencing: JBIC; cDNA library construction: Helix Research Institute supported by Japan Key Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing: Research Association for Biotechnology, Japan, Biotechnology Center, National Institute of Technology and Evaluation, Japan and HRI; cDNA mapping to human genome: Central Research Laboratory, Hitachi; evaluation and annotation: REPRORI. FEATURES Location/Qualifiers source 1..1460 /cell_line="SK-N-MC" /cell_type="neuroepithelioma" /clone="SKNMC2006814" /clone_lib="SKNMC2" /db_xref="H-InvDB:HIT000495403" /db_xref="taxon:9606" /mol_type="mRNA" /note="cloning vector: pME18SFL3" /organism="Homo sapiens" CDS 352..1260 /codon_start=1 /note="highly similar to SET and MYND domain-containing protein 5" /protein_id="BAG62443.1" /transl_table=1 /translation="MYCSAECRLAATEQYHQVLCPGPSQDDPLHPLNKLQEAWRSIHY PPETASIMLMARMVATVKQAKDKDRWIRLFSQFCNKTANEEEEIVHKLLGDKFKGQLE LLRRLFTEALYEEAVSQWFTPDGFRSLFALVGTNGQGIGTSSLSQWVHACDTLELKPQ DREQLDAFIDQLYKDIEAATGEFLNCEGSGLFVLQSCCNHSCVPNAETSFPENNFLLH VTALEDIKPGEEICISYLDCCQRERSRHSRHKILRENYLFVCSCPKCLAEADEPNVTS EEEEEEEEEEEGEPEDAELGDEMTDV" BASE COUNT 345 a 397 c 419 g 299 t ORIGIN 1 ataaggcgga ggcgcgccca agatggcggc ctccatgtgc gacgtgttct ccttctgcgt 61 gggcgtggcg ggccgcgcgc gggtctccgt ggaagtccgt ttcgtgggca gcgccaaggg 121 aaaggggctg tttgccacac agctcatccg gaagggggag accatcttcg tagaacggcc 181 cctggtggct gcacagtttc tctggaatgc actttatcgc taccgagggc actagagaag 241 gcagaggaga atgcccagag gctgaccggg aaaccaggcc aggttctgcc tcacccagag 301 ctgtgcactg tgcgcaaaga cctccaccag aactgtcccc attgccaagt gatgtactgc 361 agtgcagaat gtcggttggc agccactgag caataccacc aggtcctgtg cccaggcccc 421 tcccaggatg accccttgca tcctctcaat aagcttcagg aggcatggag gagtattcac 481 tacccacctg agactgcaag catcatgttg atggctagga tggtggccac agtgaagcag 541 gcgaaggaca aggaccgttg gatcagactc ttttcccagt tttgtaacaa aacagccaat 601 gaagaggagg aaattgtcca taaacttctg ggagacaaat tcaagggcca actggaactt 661 ctgcggagac tcttcacaga ggccctctat gaggaagcag tcagccagtg gttcactcca 721 gatggattcc ggtctctctt tgctcttgtt gggaccaatg gccaaggaat cgggaccagc 781 tccctaagcc agtgggtcca tgcctgtgac actctggagt tgaagcctca ggaccgtgag 841 cagcttgacg ccttcattga ccagctatac aaggacatcg aggcagcaac tggagagttt 901 cttaactgtg aaggatctgg cctctttgtg cttcagagct gctgcaacca cagttgtgtg 961 cccaatgcag agacctcctt tccagaaaac aacttccttt tgcatgtcac tgctctggag 1021 gatattaagc caggagagga aatttgtatc agctacttgg actgctgtca gcgggagcgc 1081 agccgccaca gccgccacaa gatcctcagg gagaactatc tatttgtctg ttcctgtccc 1141 aaatgcctgg cagaggctga tgaacccaat gtgacctcag aagaggaaga ggaagaggag 1201 gaggaggagg aaggagagcc agaagatgca gagctggggg atgagatgac tgatgtgtga 1261 tgttgccctg cccagaaagg gccctgccct agaccctgcc agaaaagggg gctcttcccc 1321 cagagaagtg gcttggaggg aacttcccac tcccattgcc tgctttcccc attccagccc 1381 tctctgctag agggtaggag agagcctgga tctctggccc caacccccac cagacctcat 1441 gccctggaca ctgctgctga //