LOCUS AK300771 1460 bp mRNA linear HUM 31-JUL-2008
DEFINITION Homo sapiens cDNA FLJ57202 complete cds, highly similar to
Ubiquitin carboxyl-terminal hydrolase 16 (EC 3.1.2.15).
ACCESSION AK300771
VERSION AK300771.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1460)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1460
/cell_line="SK-N-MC"
/cell_type="neuroepithelioma"
/clone="SKNMC2005681"
/clone_lib="SKNMC2"
/db_xref="H-InvDB:HIT000495395"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
CDS 49..1407
/codon_start=1
/note="highly similar to Ubiquitin carboxyl-terminal
hydrolase 16 (EC 3.1.2.15)"
/protein_id="BAG62436.1"
/transl_table=1
/translation="MRGCSYGLCRRGLLFCVILDDQSGKKSVNDKNLKKTVEDEDQDS
EEEKDNDSYIKERSDIPSGTSKHLQKKAKKQAKKQAKNQRRQQKIQGKVLHLNDICTI
DHPEDSEYEAEMSLQGEVNIKSNHISQEGVMHKEYCVNQKDLNGQAKMIESVTDNQKS
TEEVDMKNINMDNDLEVLTSSPTRNLNGAYLTEGSNGEVDISNGFKNLNLNAALHPDE
INIEILNDSHTPGTKVYEVVNEDPETAFCTLANREVFNTDECSIQHCLYQFTRNEKLR
DANKLLCEVCTRRQCNGPKANIKGERKHVYTNAKKQMLISLAPPVLTLHLKRFQQAGF
NLRKVNKHIKFPEILDLAPFCTLKCKNVAEENTRVLYSLYGVVEHSGTMRSGHYTAYA
KARTANSHLSNLVLHGDIPQDFEMESKGQWFHISDTHVQAVPTTKVLNSQAYLLFYER
IL"
BASE COUNT 525 a 252 c 301 g 382 t
ORIGIN
1 attcgtcacc aggaggaaga cggagctggc tgcccagccc aaaggcccat gaggggatgc
61 agttatgggc tctgtcgccg tggattgtta ttttgtgtca ttttagatga tcagagtggt
121 aagaaaagtg taaatgataa aaatctgaaa aagacagtgg aggatgaaga tcaagatagt
181 gaggaagaaa aagataacga cagttacata aaagagagaa gtgatattcc ttctggaaca
241 agtaagcact tacagaaaaa agcaaagaaa caagccaaaa agcaagccaa gaaccaacga
301 agacaacaaa aaattcaagg aaaagttctt catttaaatg atatttgtac tattgaccat
361 cctgaagaca gtgaatatga agctgaaatg tcacttcaag gagaagtaaa tattaaatcc
421 aaccatattt cacaagaggg tgttatgcat aaagaatatt gtgtcaacca gaaagatttg
481 aatggccaag caaaaatgat cgaaagtgta actgacaatc aaaaatccac agaggaagta
541 gatatgaaaa atatcaacat ggataatgat ctggaggttt taacatcttc tcccactagg
601 aatttaaatg gtgcctacct aacggaaggg agcaatggag aagtggacat ttccaatggt
661 ttcaaaaacc taaatttgaa tgctgctctt catcctgatg aaataaatat agagattctg
721 aatgatagtc atactcctgg aacaaaggtg tatgaggttg taaatgaaga tccagaaact
781 gctttctgta ctcttgcaaa cagggaagtt ttcaatactg atgagtgttc aatccaacat
841 tgtttatatc agttcacccg taatgagaaa cttcgagatg cgaataaact gctttgtgaa
901 gtatgcacac ggagacagtg taatggacca aaggcaaata taaaaggtga aaggaagcat
961 gtttacacca atgccaaaaa gcagatgcta atttctcttg ctcctcctgt tcttactctt
1021 catttaaaga gatttcagca ggctggtttt aacctacgca aagttaacaa acacataaag
1081 tttccggaaa tcttagattt ggctcctttt tgcaccctta aatgtaagaa tgttgcagaa
1141 gaaaatacaa gggtactcta ttccttatat ggagttgttg aacacagtgg tactatgagg
1201 tcggggcatt acactgccta tgccaaggca agaaccgcaa atagtcatct ctctaatctt
1261 gttcttcacg gtgatattcc acaagatttt gaaatggaat caaaagggca gtggtttcac
1321 atcagcgaca cacatgtgca agctgtgcct acaactaaag tactaaactc acaagcgtac
1381 ctcctatttt atgagagaat actgtaataa tatcaaaagc actttttctg gaaacacatt
1441 tatggctttt ataatggctg
//