LOCUS AK300765 2048 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ57603 complete cds, highly similar to
T-complex protein 1 subunit gamma.
ACCESSION AK300765
VERSION AK300765.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2048)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..2048
/cell_line="SK-N-MC"
/cell_type="neuroepithelioma"
/clone="SKNMC2005237"
/clone_lib="SKNMC2"
/db_xref="H-InvDB:HIT000495389"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
CDS 361..1863
/codon_start=1
/note="highly similar to T-complex protein 1 subunit
gamma"
/protein_id="BAG62430.1"
/transl_table=1
/translation="MMKMLLDPMGGIVMTNDGNAILREIQVQHPAAKSMIEISRTQDE
EVGDGTTSVIILAGEMLSVAEHFLEQQMHPTVVISAYRKALDDMISTLKKISIPVDIS
DSDMMLNIINSSITTKAISRWSSLACNIALDAVKMVQFEENGRKEIDIKKYARVEKIP
GGIIEDSCVLRGVMINKDVTHPRMRRYIKNPRIVLLDSSLEYKKGESQTDIEITREED
FTRILQMEEEYIQQLCEDIIQLKPDVVITEKGISDLAQHYLMRANITAIRRVRKTDNN
RIARACGARIVSRPEELREDDVGTGAGLLEIKKIGDEYFTFITDCKDPKACTILLRGA
SKEILSEVERNLQDAMQVCRNVLLDPQLVPGGGASEMAVAHALTEKSKAMTGVEQWPY
RAVAQALEVIPRTLIQNCGASTIRLLTSLRAKHTQENCETWGVNGETGTLVDMKELGI
WEPLAVKLQTYKTAVETAVLLLRIDDIVSGHKKKGDDQSRQGGAPDAGQE"
BASE COUNT 542 a 509 c 543 g 454 t
ORIGIN
1 ctctctccag aaggttctgc cggttccccc agctctgggt acccggctct gcatcgcgtc
61 gccatgatgg gccatcgtcc agtgctcgtg ctcaagacgg agtttcacca tgttgaccag
121 gctggtctcc aactgctgat gagctcaggt gatccgccca cctcggcctc ccaaagtgct
181 gagattacag gcgtgagcca ccgcgcccgg tcccttattt ttttctgatg agcaccacct
241 ccattgtctt cctttggcca gaacacaaag cgtgaatccg gaagaaaagt tcaatctgga
301 aacatcaatg ctgccaagac tattgcagat atcatccgaa catgtttggg acccaagtcc
361 atgatgaaga tgcttttgga cccaatggga ggcattgtga tgaccaatga tggcaatgcc
421 attcttcgag agattcaagt ccagcatcca gcggccaagt ccatgatcga aattagccgg
481 acccaggatg aagaggttgg agatgggacc acatcagtaa ttattcttgc aggggaaatg
541 ctgtctgtag ctgagcactt cctggagcag cagatgcacc caacagtggt gatcagtgct
601 taccgcaagg cattggatga tatgatcagc accctaaaga aaataagtat cccagtcgac
661 atcagtgaca gtgatatgat gctgaacatc atcaacagct ctattactac caaagccatc
721 agtcggtggt catctttggc ttgcaacatt gccctggatg ctgtcaagat ggtacagttt
781 gaggagaatg gtcggaaaga gattgacata aaaaaatatg caagagtgga aaagatacct
841 ggaggcatca ttgaagactc ctgtgtcttg cgtggagtca tgattaacaa ggatgtgacc
901 catccacgta tgcggcgcta tatcaagaac cctcgcattg tgctgctgga ttcttctctg
961 gaatacaaga aaggagaaag ccagactgac attgagatta cacgagagga ggacttcacc
1021 cgaattctcc agatggagga agagtacatc cagcagctct gtgaggacat tatccaactg
1081 aagcccgatg tggtcatcac tgaaaagggc atctcagatt tagctcagca ctaccttatg
1141 cgggccaata tcacagccat ccgcagagtc cggaagacag acaataatcg cattgctaga
1201 gcctgtgggg cccggatagt cagccgacca gaggaactga gagaagatga tgttggaaca
1261 ggagcaggcc tgttggaaat caagaaaatt ggagatgaat actttacttt catcactgac
1321 tgcaaagacc ccaaggcctg caccattctc ctccgggggg ctagcaaaga gattctctcg
1381 gaagtagaac gcaacctcca ggatgccatg caagtgtgtc gcaatgttct cctggaccct
1441 cagctggtgc cagggggtgg ggcctccgag atggctgtgg cccatgcctt gacagaaaaa
1501 tccaaggcca tgactggtgt ggaacaatgg ccatacaggg ctgttgccca ggccctagag
1561 gtcattcctc gcaccctgat ccagaactgt ggggccagca ccatccgtct acttacctcc
1621 cttcgggcca agcacaccca ggagaactgt gagacctggg gtgtaaatgg tgagacgggt
1681 actttggtgg acatgaagga actgggcata tgggagccat tggctgtgaa gctgcagact
1741 tataagacag cagtggagac ggcagttctg ctactgcgaa ttgatgacat cgtttcaggc
1801 cacaaaaaga aaggcgatga ccagagccgg caaggcgggg ctcctgatgc tggccaggag
1861 tgagtgctag gcaaggctac ttcaatgcac agaaccagca gagtctcccc ttttcctgag
1921 ccagagtgcc aggaacactg tggacgtctt tgttcagaag ggatcaggtt ggggggcagc
1981 ccccagtccc tttctgtccc agctcagttt tccaaaagac actgacatgt aattcttctc
2041 tattgtaa
//