LOCUS AK300763 2665 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ58493 complete cds, highly similar to
Centaurin-gamma 2.
ACCESSION AK300763
VERSION AK300763.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2665)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..2665
/cell_line="SK-N-MC"
/cell_type="neuroepithelioma"
/clone="SKNMC2005104"
/clone_lib="SKNMC2"
/db_xref="H-InvDB:HIT000495387"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
CDS 22..2112
/codon_start=1
/note="highly similar to Centaurin-gamma 2"
/protein_id="BAG62428.1"
/transl_table=1
/translation="MANYRNTSEIPLVLVGTQDAISSANPRFIDDARARKLSNDLKRC
TYYETCATYGLNVERVFQDVAQKIVATRKKQQLSIGPCKSLPNSPSHSSVCSAQVSAV
HISQTSNGGGSLSDYSSSVPSTPSTSQKELRIDVPPTANTPTPVRKQSKRRSNLFTSR
KGSDPDKEKKGLESRADSIGSGRAIPIKQGMLLKRSGKSLNKEWKKKYVTLCDNGVLT
YHPSLHDYMQNVHGKEIDLLRTTVKVPGKRPPRATSACAPISSPKTNGLSKDMSSLHI
SPNSGNVTSASGSQMASGISLVSFNSRPDGMHQRSYSVSSADQWSEATVIANSAISSD
TGLGDSVCSSPSISSTTSPKLDPPPSPHANRKKHRRKKSTSNFKADGLSGTAEEQEEN
FEFIIVSLTGQTWHFEATTYEERDAWVQAIESQILASLQSCESSKNKSRLTSQSEAMA
LQSIRNMRGNSHCVDCETQNPNWASLNLGALMCIECSGIHRNLGTHLSRVRSLDLDDW
PVELIKVMSSIGNELANSVWEESSQGRTKPSVDSTREEKERWIRAKYEQKLFLAPLPC
TELSLGQHLLRATADEDLRTAILLLAHGSRDEVNETCGEGDGRTALHLACRKGNVVLA
QLLIWYGVDVTARDAHGNTALAYARQASSQECIDVLLQYGCPDERFVLMATPNLSRRN
NNRNNSSGRVPTII"
BASE COUNT 648 a 809 c 739 g 469 t
ORIGIN
1 gtttaccact actacagtcg aatggccaac tatcggaaca cgagcgagat tcctctggtt
61 ctggtgggaa cccaggatgc cataagttct gctaacccga ggttcatcga tgacgccagg
121 gcgaggaagc tctccaacga cctgaaacgg tgcacgtact acgagacgtg tgctacatac
181 gggctgaatg tggagagggt cttccaggac gttgcccaga agattgttgc cacaaggaag
241 aagcagcagc tgtccatagg accctgcaag tcgctaccta attctcccag ccattcctcc
301 gtctgttccg cgcaggtgtc tgccgtgcac atcagccaga caagtaatgg aggtgggagt
361 ttaagcgact attcctcctc cgttccatcg actcccagca ccagccagaa ggaacttcgg
421 atcgatgttc ctcccactgc caacacgccc acgcccgttc gcaagcagtc taagcgccgg
481 tccaacctgt tcacttctcg gaaagggagc gacccagaca aagagaagaa aggcctggag
541 agtcgtgcgg acagcattgg gagcggccga gccatcccaa ttaaacaggg catgctgttg
601 aagcgaagtg gcaaatcgtt gaataaagag tggaaaaaga aatatgtcac cctgtgtgac
661 aatggcgtgc tgacctatca tcccagttta catgattaca tgcagaatgt tcatggtaag
721 gagattgacc ttctgagaac cactgtgaaa gtcccaggga agaggccacc ccgagccacg
781 tcagcctgcg cacccatctc cagccctaaa accaatggcc tatccaagga catgagcagt
841 ttacacatct cacccaattc agggaatgtc actagtgcat ctgggtctca gatggcaagc
901 ggcatcagcc tggtctcctt caacagccga cccgacggca tgcaccagcg ctcctactca
961 gtctccagtg ccgaccagtg gagtgaggct acggtcattg caaactcggc catcagcagt
1021 gacacagggc tgggtgactc cgtatgctcc agccccagta tctccagcac caccagcccc
1081 aagctcgacc cgcccccctc ccctcacgcc aacagaaaga agcaccgaag gaagaaaagc
1141 actagcaact tcaaagccga cggcctgtcc ggcactgctg aagaacaaga agaaaatttt
1201 gagtttatca ttgtgtccct cactggccaa acatggcact ttgaagccac gacgtatgag
1261 gagcgggacg cctgggtcca agccatcgag agccagatcc tggccagcct gcagtcgtgc
1321 gagagcagca agaacaagtc ccggctgacg agccagagcg aggccatggc cctgcagtcg
1381 atccggaaca tgcgcgggaa ctcccactgt gtggactgcg agacccagaa tcccaactgg
1441 gccagtttga acttgggagc cctcatgtgc atcgaatgct cagggatcca ccggaatctt
1501 ggcacccacc tttcccgagt ccgatctctg gacctggatg actggccagt cgagctcatc
1561 aaggtgatgt catccatcgg gaacgagcta gccaacagcg tctgggaaga gagcagccag
1621 gggcggacga aaccatcggt agactccaca agggaagaga aggaacggtg gatccgtgcc
1681 aagtacgagc agaagctctt cctggccccg ctgccctgca cggagctgtc cctgggccag
1741 cacctgctgc gggccaccgc cgacgaggac ctgcggacgg ccatcctgct gctggcacac
1801 ggctcccggg acgaggtgaa cgagacctgc ggggagggag acggccgcac ggcgctgcat
1861 ctggcctgcc gcaaggggaa tgtggtcctg gcgcagctcc tgatctggta cggagtggac
1921 gtcacggccc gagatgccca cgggaacaca gctctggcct acgcccggca ggcctccagc
1981 caggagtgca tcgacgtgct gctgcagtac ggctgccccg acgagcgctt cgtgctcatg
2041 gccaccccta acctgtccag gagaaacaat aaccggaaca acagcagtgg gagggtgccc
2101 accatcatct gaggaacagc cgtgcccgcc tgctcgccgc acctgggacg cggcagcctc
2161 gccgcattct cgctcagaag tcgcagcacg tgagtcccgt cgcatcccct ccctcttcct
2221 ggtggccacc tccctcccgc ccacccactc tcaccccaaa caaaatcaca aaacctggac
2281 atccctcaag gggcgaagag gcggccggga gactgcagaa gtggctcctt ttcataaact
2341 cccctaaacc acacacagga gagagcgacg ggcctcggcc ctttgatgat agcacatggc
2401 gcaggaccct tgtcctggtg gcacaaggga tggggacgcg agggggaggg gaggcgagga
2461 acaaggagaa ggggcaactt tccttaactg gcagttgagc acatagtaca tttcccctct
2521 accaaacgga acacttggat tccatctctt ctctgaggag ctcgacggca taaatcagaa
2581 gcaagcacag agtttgtcag gtttgaagcc cctatgatgg tgtgtgtcaa atcagttgta
2641 gctaatctgt ccagggagaa tactg
//