LOCUS AK300736 2020 bp mRNA linear HUM 21-JAN-2009
DEFINITION Homo sapiens cDNA FLJ53204 complete cds, highly similar to CGTHBA
protein.
ACCESSION AK300736
VERSION AK300736.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2020)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..2020
/cell_line="SK-N-MC"
/cell_type="neuroepithelioma"
/clone="SKNMC2000078"
/clone_lib="SKNMC2"
/db_xref="H-InvDB:HIT000495360"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
CDS 90..1724
/codon_start=1
/note="highly similar to CGTHBA protein"
/protein_id="BAH13336.1"
/transl_table=1
/translation="MRDNTSPISVILVSSGSRGNKLLFRYPFQRSQEHPASQTSKPRS
RYAASNTGDHADEQDGDSRFSDVILATILATKSEMCGQKFELKIDNVRFVGHPTLLQH
ALGQANADPSVINCLHNLSRRIATVLQHEERRCQYLTREAKLILALQDEVSAMADGNE
GPQSPFHHILPKCKLARDLKEAYDSLCTSGVVRLHINSWLEVSFCLPHKIHYAASSLI
PPEAIERSLKAIRPYHALLLLSDEKSLLGELPIDCSPALVRVIKTTSAVKNLQQLAQD
ADLALLQVFQLAAHLVYWGKAIIIYPLCENNVYMLSPNASVCLYSPLAEQFSHQFPSH
DLPSVLAKFSLPVSLSEFRNPLAPAVQETQLIQMVVWMLQRRLLIQLHTYVCLMASPS
EEEPRPREDDVPFTARVGGRSLSTPNALSFGSPTSSDDMTLTSPSMDNSSAELLPSGD
SPLNQRMTENLLASLSEHERAAILSVPAAQNPEDLRMFARLLHYFRGRHHLEEIMYNE
NTRRSQLLMLFDKFRSVLVVTTHEDPVIAVFQALLP"
BASE COUNT 366 a 692 c 563 g 399 t
ORIGIN
1 gtccccgcct cgtcctcctc aggccccctc cgcctccggc tccgtcctcc tctggccccc
61 tccgcccccg gccccggccc cacggcggga tgcgggacaa caccagcccc atcagcgtga
121 ttctggtgag ctcggggagc aggggcaata agctgctgtt caggtacccc ttccagagaa
181 gccaggagca cccggcgtcc cagacaagta agccgcgtag cagatacgct gccagcaaca
241 cgggcgacca tgctgatgag caggacggcg attccaggtt ttcagatgtt attctggcaa
301 caattttggc aaccaagtct gaaatgtgtg gccaaaaatt tgaactgaag attgataatg
361 tgcgatttgt tgggcaccca acactgctac agcatgctct ggggcaggcc aacgcagacc
421 cgtcagtgat aaactgtctg cataacctgt cccgtcgtat cgccaccgtg ctgcagcacg
481 aggagcgccg ctgccagtac ctcacccggg aggccaagct gatcctggcg ctccaggatg
541 aggtgtccgc catggctgat ggaaatgaag gtcctcagtc cccattccat cacatcctgc
601 ccaagtgcaa gctggccagg gacctcaagg aagcttatga cagcctgtgc acgtcgggcg
661 tagttcggct tcacatcaac agctggctgg aggtgagctt ctgcctgccc cacaagatcc
721 actatgcggc ctccagtctg atccccccag aggccatcga acggagcctg aaagccatcc
781 gcccctacca tgccctgctg ctgctcagtg atgagaagtc cttgctgggt gagcttccta
841 ttgactgctc ccctgcccta gtgcgggtga tcaagaccac atctgctgtg aagaacctgc
901 agcagctagc ccaagatgcg gacctggcct tgctgcaggt tttccagctt gcagctcatc
961 tggtgtactg gggcaaggcc atcatcatct acccgctgtg tgagaacaac gtctacatgc
1021 tgtctcccaa tgccagcgta tgtctgtact ccccgctggc cgagcagttc tcccaccagt
1081 tcccatctca tgacctgccg tccgttcttg ccaagttctc cttgccggtc tccttgtcag
1141 aatttaggaa tcccctggcc cccgctgtgc aggagaccca gctcatccag atggtggtgt
1201 ggatgctgca gcgccggctt ctcatccagc tgcacaccta tgtctgcctg atggcctcac
1261 ccagcgagga ggagccccgt ccgcgagagg acgacgtccc cttcactgcc cgggtcggcg
1321 gtcgcagcct cagcacgccc aacgccctca gctttggctc cccaaccagc agcgatgaca
1381 tgaccctcac cagccccagc atggacaact ccagcgcaga gctacttccc agcggggact
1441 cgccactgaa ccagaggatg acggagaacc tgctggccag cctgtcggag catgaacgcg
1501 cagccatcct cagtgtaccc gcagcccaga accctgagga cctccgcatg tttgccaggc
1561 tccttcacta cttccgcggc cgccaccacc tggaggagat tatgtacaac gagaacacgc
1621 ggcgctccca gctgctcatg ctgtttgaca agttccgcag cgtgctggtg gtgaccaccc
1681 acgaggaccc tgtcattgcc gtcttccagg ctctgctccc ctgagcccag gcggagggcg
1741 gaaggctgct ggggtgcgca ggtgggcgct cgcgtctccc caccccaggg ctccccccgt
1801 gctgaggctg agccctcttg gccctgaggc ctggcattgg gtggatgcgg gctggccgtg
1861 gcccagtgaa gcctgcagag ccccgctgtc cttgcccctg gtggttccgc tgtggggctg
1921 ctgccctctg tgttcctacg cttccctcca gtccttgccg cacgcgtagg catctccacg
1981 ctggaggggg gcctgccagg actcctgtct ctgggtgagg
//