LOCUS AK300728 2001 bp mRNA linear HUM 24-JUL-2008 DEFINITION Homo sapiens cDNA FLJ56909 complete cds, highly similar to Rattus norvegicus nexilin (Nexn), transcript variant s, mRNA. ACCESSION AK300728 VERSION AK300728.1 KEYWORDS FLI_CDNA; oligo capping. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2001) AUTHORS Isogai,T. and Yamamoto,J. TITLE Direct Submission JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases. Contact:Takao Isogai Reverse Proteomics Research Institute; 1-9-11 Kaji-cho, Chiyoda-ku, Tokyo 101-0044, Japan E-mail :flj-cdna@nifty.com REFERENCE 2 AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K., Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y., Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M., Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T. TITLE NEDO human cDNA sequencing project focused on splicing variants JOURNAL Unpublished (2007) COMMENT Human cDNA sequencing project focused on splicing variants of mRNA in NEDO functional analysis of protein and research application project supported by Ministry of Economy, Trade and Industry, Japan; cDNA selection for complete cds sequencing: Reverse Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan (Hitachi) and Japan Biological Informatics Consortium, Japan (JBIC); cDNA complete cds sequencing: JBIC; cDNA library construction: Helix Research Institute supported by Japan Key Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing: Research Association for Biotechnology, Japan, Biotechnology Center, National Institute of Technology and Evaluation, Japan and HRI; cDNA mapping to human genome: Central Research Laboratory, Hitachi; evaluation and annotation: REPRORI. FEATURES Location/Qualifiers source 1..2001 /clone="SKMUS2008872" /clone_lib="SKMUS2" /db_xref="H-InvDB:HIT000495352" /db_xref="taxon:9606" /mol_type="mRNA" /note="cloning vector: pME18SFL3" /organism="Homo sapiens" /tissue_type="skeletal muscle" CDS 231..1757 /codon_start=1 /note="highly similar to Rattus norvegicus nexilin (Nexn), transcript variant s, mRNA" /protein_id="BAG62401.1" /transl_table=1 /translation="MNDISQKAEILLSSSKPVPKTYVPKLGKGDVKDKFEAMQRAREE RNQRRSRDEKQRRKEQYIREREWNRRKQEIKEMLASDDEEDVSSKVEKAYVPKLTGTV KGRFAEMEKQRQEEQRKRTEEERKRRIEQDMLEKRKIQRELAKRAEQEGDDSLLITVV PVKSYKTSGKMKKNFEDLEKEREEKERIKYEEDKRIRYEEQRPSLKEAKCLSLVMDDE IESEAKKESLSPGKLKLTFEELERQRQENRKKQAEEEARKRLEEEKRAFEEARRQMVN EDEENQDTAKIFKGYRPGKLKLSFEEMERQRREDEKRKAEEEARRRIEEEKKAFAEAR RNMVVDDDSPEMYKTISQEFLTPGKLEINFEELLKQKMEEEKRRTEEERKHKLEMEKQ EFEQLRQEMGEEEEENETFGLSREYEELIKLKRSGSIQAKNLKSKFEKIGQLSEKEIQ KKIEEERARRRAIDLEIKEREAENFHEEDDVDVRPARKSEAPFTHKVNMKARFEQIIF " BASE COUNT 829 a 295 c 478 g 399 t ORIGIN 1 aaacttgctg ctggagacgg cggcggcggc ggcggcagcg gcagccagag gactcccagc 61 ggctggagca gaagtgttag cggccagagc tcccagaccc ctacccacag ccaggcggga 121 cgcgcacagt ccctccacgc ggaaagaagt accttcgccg gtcaccggct cctgcagggt 181 gcaaatatat acagagcttc ataatcagcc caagaccaca tagagcaaac atgaatgata 241 tttcccaaaa ggctgagatt ctgctttctt catctaaacc tgtcccaaaa acctatgtac 301 caaaacttgg caagggcgat gtaaaggata agtttgaagc catgcagaga gccagggaag 361 aaagaaatca aaggagatct agagacgaaa aacaaagaag aaaagaacaa tatattagag 421 agagagaatg gaacaggaga aagcaggaga ttaaagaaat gcttgcttct gatgatgagg 481 aagatgtatc ttctaaagta gaaaaggctt atgttccaaa attaacagga actgtgaagg 541 gtagatttgc tgaaatggag aaacaaagac aagaggaaca aaggaagaga acggaggagg 601 aacgaaaacg cagaattgag caggatatgt tagaaaagag gaaaatacag cgtgaattag 661 caaaaagggc tgaacaggaa ggagatgatt cactacttat aactgtggta cctgtcaaat 721 catataaaac atctggaaaa atgaaaaaga attttgagga tctagaaaaa gaacgtgaag 781 agaaagaaag gatcaagtac gaggaagata aaagaataag atatgaagaa caacgaccat 841 ctctcaagga agcaaagtgt ctttcattag ttatggatga tgaaatagaa agtgaagcaa 901 aaaaagaatc actttctccc ggaaaattga aactaacttt tgaagaactg gagcgacaaa 961 gacaagaaaa ccgaaagaag caagctgaag aggaagcaag aaaacgttta gaagaagaga 1021 agcgtgcttt tgaagaagca aggcggcaaa tggtaaatga agatgaggaa aaccaagaca 1081 cagcaaaaat ttttaaaggg taccgccctg gtaaactcaa actcagtttt gaagaaatgg 1141 aaaggcaaag aagagaagat gaaaaaagga aagcagaaga agaagccaga aggagaatag 1201 aggaagaaaa gaaggcgttt gctgaagcaa ggagaaatat ggtagtagat gatgactccc 1261 cagagatgta taagacaatc tctcaagaat ttcttacacc gggaaaactg gaaattaatt 1321 ttgaagaatt attaaaacaa aaaatggaag aagaaaaacg acgaacagag gaggaacgga 1381 agcataagct agaaatggag aaacaagaat ttgaacaact gagacaggaa atgggagagg 1441 aagaggaaga aaatgaaacc tttggattga gcagagaata tgaagaactg atcaaattaa 1501 aaaggagtgg ctctattcaa gctaaaaacc taaaaagcaa gtttgaaaaa attggacagt 1561 tgtctgaaaa agaaatacag aaaaaaatag aagaagagcg agcaagaagg agagcaattg 1621 accttgaaat taaagagcga gaagctgaaa attttcatga ggaagatgat gttgatgtta 1681 ggcctgcaag aaaaagcgag gctccattta ctcacaaagt gaatatgaaa gctagatttg 1741 aacaaattat attttaatga aaaaactttc tattaatagt tcacgcaaga gaaaacactt 1801 tcaacatagt cgaaggcttc aagatctaag tgtatcagac ttagggaaaa agtggcacaa 1861 ccttcgattt aaaattctag tctttaaaat gagtttgtaa ataattagct attacgttct 1921 attaagttgt tttatatttt aattttctgg aagacaattt tattttacaa cgtgaaccca 1981 aataaagtaa cttctgtatt t //