LOCUS AK300679 1560 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ61416 complete cds, highly similar to Homo
sapiens dual specificity phosphatase 13 (DUSP13), transcript
variant 3, mRNA.
ACCESSION AK300679
VERSION AK300679.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1560)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1560
/clone="SKMUS2003767"
/clone_lib="SKMUS2"
/db_xref="H-InvDB:HIT000495303"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="skeletal muscle"
CDS 526..1509
/codon_start=1
/note="highly similar to Homo sapiens dual specificity
phosphatase 13 (DUSP13), transcript variant 3, mRNA"
/protein_id="BAG62362.1"
/transl_table=1
/translation="MGLPQPRLPAPALQAGPATAGCRPELRGQSWSLLPAMGLCHFAT
LALILLVLLEALAQADTQKMVEAQRGVGPRACYSIWLLLAPTPPLSHCLQSPQKQHQV
CGDRRLKAGSTNCPSEKCTAWARYSHRMDSLQKQDLRRPKIHGAVQASPYQPPTLASL
QRLLWVRQAATLNHIDEVWPSLFLGDAYAARDKSKLIQLGITHVVNAAAGKFQVDTGA
KFYRGMSLEYYGIEADDNPFFDLSVYFLPVARYIRAALSVPQGRVLVHCAMGVSRSAT
LVLAFLMIYENMTLVEAIQTVQAHRNICPNSGFLRQLQVLDNRLGRETGRF"
BASE COUNT 291 a 511 c 463 g 295 t
ORIGIN
1 agtgaccaca gaggcagagg ggtgggcggg ctggcccatg gcttagacct ctctcccaga
61 gctgggggga gaggacaaag ccacgccttg ccccagcatc ctggagctgg aggagctcct
121 gcgggcaggg aagtcttctt gcagccgtgt ggacgaagtt tggcccaacc tttccatagg
181 agatgcggcc acggcaaaca accgctttga gctgtggaag ctgggcatca cccacgtgct
241 gaacgccgcc cacaagggcc tctactgtca gggcggccct gacttctacg gcagcagtgt
301 gagctacctg ggggtgccag cccacgacct ccctgatttt gacatcagtg cctacttctc
361 ctctgcggct gacttcatcc accgtgccct caacacgcct ggggccaagg tcctggtgca
421 ctgtgtggtg ggtgtgagcc gctctgccac gctggtcctg gcctacctca tgctgcacca
481 gcggctgtcc ctgcgccagg cggtgatcac cgtgaggcag caccgatggg tcttccccaa
541 ccgaggcttc ctgcaccagc tctgcaggct ggaccagcaa ctgcggggtg ccggccagag
601 ctgaggggcc agagctggtc cttactccct gccatggggc tctgccactt tgccaccctg
661 gcactgatcc tgctggtgct gctggaggct ctggcccagg cggacacaca gaagatggtg
721 gaagcccagc gtggggtcgg ccctagagcc tgctactcca tctggctcct cctggcgcct
781 acaccccctc tcagccactg tcttcagtct ccacagaaac agcatcaagt gtgcggagac
841 aggcggctga aagccggcag cacgaactgc ccgtcagaga agtgcacagc ctgggccaga
901 tactcccaca ggatggactc actgcagaag caggacctcc ggaggcccaa gatccatggg
961 gcagtccagg catctcccta ccagccgccc acattggctt cgctgcagcg cttgctgtgg
1021 gtccgtcagg ctgccacact gaaccatatc gatgaggtct ggcccagcct cttcctggga
1081 gatgcgtacg cagcccggga caagagcaag ctgatccagc tgggaatcac ccacgttgtg
1141 aatgccgctg caggcaagtt ccaggtggac acaggtgcca aattctaccg cggaatgtcc
1201 ctggagtact atggcattga ggcggacgac aaccccttct tcgacctcag tgtctacttt
1261 ctgcctgttg ctcgatacat ccgagctgcc ctcagtgttc cccaaggccg cgtgctggta
1321 cactgtgcca tgggggtaag ccgctctgcc acacttgtcc tggccttcct catgatctat
1381 gagaacatga cgctggtaga ggccatccag acggtgcagg cccaccgcaa tatctgccct
1441 aactcaggct tcctccggca gctccaggtt ctggacaacc gactggggcg ggagacgggg
1501 cggttctgat ctggcaggca gccaggatcc ctgacccttg gcccaacccc accagcctgg
//