LOCUS AK300656 996 bp mRNA linear HUM 21-JAN-2009
DEFINITION Homo sapiens cDNA FLJ56771 complete cds, highly similar to Homo
sapiens SET domain and mariner transposase fusion gene (SETMAR),
mRNA.
ACCESSION AK300656
VERSION AK300656.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 996)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..996
/clone="SKMUS2000288"
/clone_lib="SKMUS2"
/db_xref="H-InvDB:HIT000495280"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="skeletal muscle"
CDS 119..613
/codon_start=1
/note="highly similar to Homo sapiens SET domain and
mariner transposase fusion gene (SETMAR), mRNA"
/protein_id="BAH13322.1"
/transl_table=1
/translation="MEMMLDKKQIRAIFLFKFKMGHKAAETTHNISNTFGPGTANERT
VQWWFKKFHKGEESLEDEEHSGQPSEVDSDQLRAIIEADPLITTPEVAEELNIDHSTV
VRHLKQIGKVKKLGKWVPCELSEKQKNCRFEVSSSLILRNNSEPFLDQIVMCHEKWIL
YDSQ"
BASE COUNT 293 a 242 c 218 g 243 t
ORIGIN
1 aagctgggcc gtgttcaccc ctccgcgctg tcacaatcgc cttgccctcc cttgcctctc
61 tgtctactct gcgttccccg ctgggaggag ggtctggtga taaaatagcg gcgagactat
121 ggaaatgatg ttagacaaaa agcaaattcg agcaattttc ttattcaagt tcaaaatggg
181 tcataaagca gcggagacaa ctcacaacat cagcaacaca tttggcccag gaactgctaa
241 tgaacgcaca gtgcagtggt ggttcaagaa gtttcacaaa ggagaggaga gccttgaaga
301 tgaggagcat agtggccagc catcggaagt tgacagtgac caattgagag caatcatcga
361 agctgatcct cttataacta cacctgaagt tgctgaagaa ctcaacattg accattctac
421 agtcgttcgg catttgaagc aaattggaaa ggtgaaaaag cttggtaagt gggtgccttg
481 tgaactaagc gaaaaacaaa aaaattgtcg ttttgaagtg tcatcttctc ttattctacg
541 caacaacagt gaaccatttc tcgatcagat tgtgatgtgc catgaaaagt ggattttata
601 tgacagccag tgacagccag ctcagtggtt ggaccaggaa gctccaaagc atttcccaaa
661 gccaaacttg caccagaata aggtcatggt cactgtttgg tggtctgctg ctggtctgat
721 ccactacaac tttctgaatc ctggcgaaac ccttacatct gagaaatatg ctcagtaaat
781 cgatgagatg caccaaaaac tacaacacct gccgctggca ttggtcaaca gaaagggccc
841 aattcttctc cacgacagtg cccaaccaca cattgcacaa ccagcacttg ggaaattgaa
901 cgaattgggc tacgaagttt tgcctcatcc tccatattca cctgacctct cgccaactga
961 ctaccacttc ttcaagcatc ttgacaactt tttgca
//