LOCUS AK300641 1425 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ51103 complete cds, highly similar to Sorting
nexin-17.
ACCESSION AK300641
VERSION AK300641.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1425)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1425
/clone="RECTM2001112"
/clone_lib="RECTM2"
/db_xref="H-InvDB:HIT000495265"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="rectum"
CDS 350..1339
/codon_start=1
/note="highly similar to Sorting nexin-17"
/protein_id="BAG62330.1"
/transl_table=1
/translation="MSWRLAAKLDLPDDLIGYFSLFLVREKEDGAFSFVRKLQEFELP
YVSVTSLRSQEYKIVLRKSYWDSAYDDDVMENRVGLNLLYAQTVSDIERGWILVTKEQ
HRQLKSLQEKVSKKEFLRLAQTLRHYGYLRFDACVADFPEKDCPVVVSAGNSELSLQL
RLPGQQLREGSFRVTRMRCWRVTSSVPLPSGSTSSPGRGRGEVRLELAFEYLMSKDRL
QWVTITSPQAIMMSICLQSMVDELMVKKSGGSIRKMLRRRVGGTLRRSDSQQAVKSPP
LLESPDATRESMVKLSSKLSAVSLRGIGSPSTDASASDVHGNFAFEGIGDEDL"
BASE COUNT 312 a 375 c 435 g 303 t
ORIGIN
1 gggcagggct cccaaaatcg cgagtgaggc tgcggggact cgctgagcag cggaggggga
61 gcgtgcagag ccgctgcggc cctcacagtc cggagcccgg ccgtgccgtg ccgtagggaa
121 catgcacctt tccattcccg aaaccgagtc ccgcagcggg gacagcggcg gctccgccta
181 cgtgttcggc aagacccatt gcttgggagc agcgagactt tcaacagttt cctgcgtcgg
241 gcacaacagg agacacagca ggtccccaca gaggaagtgt ccttggaagt gctgctcagc
301 aacgggcaga aagttctggt caacgtgcta acttcagatc agactgagga tgtcctggag
361 gctagctgca aagctggatc ttccagatga cttgattgga tactttagtc tattcttagt
421 tcgagaaaaa gaggatggag ccttttcttt tgtacggaag ttgcaagagt ttgagctgcc
481 ttatgtgtct gtcaccagcc ttcggagtca agagtataag attgtgctaa ggaagagtta
541 ttgggactct gcctatgatg acgatgtcat ggagaaccgg gttggcctga acctgcttta
601 tgctcagacg gtatcagata ttgagcgtgg gtggatcttg gtcaccaagg aacagcaccg
661 gcaactcaaa tctctgcaag agaaagtctc caagaaggag ttcctgagac tggcccagac
721 gctgcggcac tatggctact tgcgctttga tgcctgtgtg gctgacttcc cagaaaagga
781 ctgtcctgtg gtggtgagcg cgggcaacag tgagctcagc ctgcagctcc gcctgcctgg
841 ccagcaactc cgagaaggct ccttccgggt cacccgcatg cgatgctggc gggtcacctc
901 ctctgtacca ttgcccagtg gaagcacgag cagcccaggc cggggccggg gtgaggtgcg
961 cctggaactg gcttttgaat acctcatgag caaggaccgg ctacagtggg tcaccatcac
1021 tagcccccag gctatcatga tgagcatctg cttgcagtcc atggttgatg aactgatggt
1081 gaagaaatct ggcggcagta tcaggaagat gctgcgccgg cgggtggggg gtactctgag
1141 acgctcagac agccagcaag cagtgaagtc cccaccactg cttgagtcac ctgatgccac
1201 ccgggagtct atggtcaaac tctcaagtaa gctgagtgcc gtgagcttgc ggggaattgg
1261 cagtcccagc acagatgcca gtgccagtga tgtccacggc aatttcgcct tcgagggcat
1321 tggagatgag gatctgtaat ctccactgct tggatgtctg ccctctaccc cagaggaatt
1381 tacagaaact tgccctgtgc ctgtgtcccc catgctaggg gcgga
//