LOCUS AK300640 1441 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ60161 complete cds, moderately similar to
Gamma-secretase subunit APH-1A.
ACCESSION AK300640
VERSION AK300640.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1441)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1441
/clone="RECTM2000931"
/clone_lib="RECTM2"
/db_xref="H-InvDB:HIT000495264"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="rectum"
CDS 205..777
/codon_start=1
/note="moderately similar to Gamma-secretase subunit
APH-1A"
/protein_id="BAG62329.1"
/transl_table=1
/translation="MGAAVFFGCTFVAFGPAFALFLITVAGDPLRVIILVAGKADEGL
ASLSEDGRSPISIRQMAYVSGLSFGIISGVFSVINILADALGPGVVGIHGDSPYYFLT
SAFLTAAIILLHTFWGVVFFDACERRRYWALGLVVGSHLLTSGLTFLNPWYEASLLPI
YAVTVSMGLWAFITAGGSLRSIQRSLLCKD"
BASE COUNT 225 a 445 c 381 g 390 t
ORIGIN
1 cttcggcttc cgtagaggaa gtggcgcgga ccttcatttg gggtttcggt tccccccctt
61 ccccttcccc ggggtctggg ggtgacattg caccgcgccc ctcgtggggt cgcgttgcca
121 ccccacgcgg actccccagc tggcgcgccc ctcccatttg cctgtcctgg tcaggccccc
181 accccccttc ccacctgacc agccatgggg gctgcggtgt ttttcggctg cactttcgtc
241 gcgttcggcc cggccttcgc gcttttcttg atcactgtgg ctggggaccc gcttcgcgtt
301 atcatcctgg tcgcagggaa ggcagatgag gggttagcat cgctgagtga ggacggaaga
361 tcacccatct ccatccgcca gatggcctat gtttctggtc tctccttcgg tatcatcagt
421 ggtgtcttct ctgttatcaa tattttggct gatgcacttg ggccaggtgt ggttgggatc
481 catggagact caccctatta cttcctgact tcagcctttc tgacagcagc cattatcctg
541 ctccatacct tttggggagt tgtgttcttt gatgcctgtg agaggagacg gtactgggct
601 ttgggcctgg tggttgggag tcacctactg acatcgggcc tgacattcct gaacccctgg
661 tatgaggcca gcctgctgcc catctatgca gtcactgttt ccatggggct ctgggccttc
721 atcacagctg gagggtccct ccgaagtatt cagcgcagcc tcttgtgtaa ggactgacta
781 cctggactga tcgcctgaca gatcccacct gcctgtccac tgcccatgac tgagcccagc
841 cccagcccgg gtccattgcc cacattctct gtctccttct cgtcggtcta ccccactacc
901 tccagggttt tgctttgtcc ttttgtgacc gttagtctct aagctttacc aggagcagcc
961 tgggttcagc cagtcagtga ctggtgggtt tgaatctgca cttatcccca ccacctgggg
1021 acccccttgt tgtgtccagg actccccctg tgtcagtgct ctgctctcac cctgcccaag
1081 actcacctcc cttcccctct gcaggccgac ggcaggagga cagtcgggtg atggtgtatt
1141 ctgccctgcg catcccaccc gaggactgag ggaacctagg ggggacccct gggcctgggg
1201 tgccctcctg atgtcctcgc cctgtatttc tccatctcca gttctggaca gtgcaggttg
1261 ccaagaaaag ggacctagtt tagccattgc cctggagatg aaattaatgg aggctcaagg
1321 atagatgagc tctgagtttc tcagtactcc ctcaagactg gacatcttgg tctttttctc
1381 aggcctgagg gggaaccatt tttggtgtga taaataccct aaactgcctt tttttctttt
1441 t
//