LOCUS AK300613 2189 bp mRNA linear HUM 31-JUL-2008
DEFINITION Homo sapiens cDNA FLJ58245 complete cds, highly similar to
Receptor-type tyrosine-protein phosphatase epsilon precursor (EC
3.1.3.48).
ACCESSION AK300613
VERSION AK300613.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2189)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..2189
/cell_type="pulmonary artery endothelial cells (HPAEC)"
/clone="PUAEN2005608"
/clone_lib="PUAEN2"
/db_xref="H-InvDB:HIT000495237"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="primary culture, pulmonary artery endothelial
cells"
/organism="Homo sapiens"
CDS 83..2092
/codon_start=1
/note="highly similar to Receptor-type tyrosine-protein
phosphatase epsilon precursor (EC 3.1.3.48)"
/protein_id="BAG62307.1"
/transl_table=1
/translation="MVSQRLPRKTRGPPWSPCVHSCWWVLACRSPGLSGATRPLPTAT
RQPRPQALRTRAPPSRCWPGCYCRCCSSSSCSFSPPTSSGSGPKKYFPIPVEHLEEEV
RIRSADDCKQFREEFNSLPSGHIQGTFELANKEENREKNRYPNILPNDHSRVILSQLD
GIPCSDYINASYIDGYKEKNKFIAAQGPKQETVNDFWRMVWEQKSATIVMLTNLKERK
EEKCHQYWPDQGCWTYGNIRVCVEDCVVLVDYTIRKFCIQPQLPDGCKAPRLVSQLHF
TSWPDFGVPFTPIGMLKFLKKVKTLNPVHAGPIVVHCSAGVGRTGTFIVIDAMMAMMH
AEQKVDVFEFVSRIRNQRPQMVQTDMQYTFIYQALLEYYLYGDTELDVSSLEKHLQTM
HGTTTHFDKIGLEEEFRKLTNVRIMKENMRTGNLPANMKKARVIQIIPYDFNRVILSM
KRGQEYTDYINASFIDGYRQKDYFIATQGPLAHTVEDFWRMIWEWKSHTIVMLTEVQE
REQDKCYQYWPTEGSVTHGEITIEIKNDTLSEAISIRDFLVTLNQPQARQEEQVRVVR
QFHFHGWPEIGIPAEGKGMIDLIAAVQKQQQQTGNHPITVHCRNSMNSATKWYKILLI
YFLIMLISNEDSCLKIFFNLMEQRRSHFPQDAGLYPPLSGTAFAL"
BASE COUNT 576 a 600 c 557 g 456 t
ORIGIN
1 acagcagacc cagttcaaag ttggaattct tctagaaatc ctttctcagc tgtcagggaa
61 acatggattc tccaaggcca ggatggtttc ccagcgtctt cccaggaaga caagaggtcc
121 accatggagc ccttgtgtcc actcctgctg gtgggtttta gcttgccgct cgccagggct
181 ctcaggggca acgagaccac tgccgacagc aacgagacaa ccacgacctc aggccctccg
241 gacccgggcg cctcccagcc gctgctggcc tggctgctac tgccgctgct gctcctcctc
301 ctcgtgctcc ttctcgccgc ctacttcttc aggttcaggg cccaagaagt attttcccat
361 ccccgtggag cacctggagg aggaggtccg tatcagatcc gccgacgact gcaagcagtt
421 tcgggaggag ttcaactcat tgccatctgg acacatacaa ggaacttttg aactggcaaa
481 taaagaagaa aacagagaaa aaaacagata tcccaacatc cttcccaatg accattctag
541 ggtgattctg agccaactgg atggaattcc ctgttcagac tacatcaatg cttcctacat
601 agatggttac aaagagaaga ataaattcat agcagctcaa ggtcccaaac aggaaacggt
661 taacgacttc tggagaatgg tctgggagca aaagtctgcg accatcgtca tgttaacaaa
721 cttgaaagaa aggaaagagg aaaagtgcca tcagtactgg cccgaccaag gctgctggac
781 ctatggaaac atccgggtgt gcgtggagga ctgcgtggtt ttggtcgact acaccatccg
841 gaagttctgc atacagccac agctccccga cggctgcaaa gcccccaggc tggtctcaca
901 gctgcacttc accagctggc ccgacttcgg agtgcctttt acccccattg ggatgctgaa
961 gttcctcaag aaagtaaaga cgctcaaccc cgtgcacgct gggcccatcg tggtccactg
1021 tagcgcgggc gtgggccgga cgggcacctt cattgtgatc gatgccatga tggccatgat
1081 gcacgcggag cagaaggtgg atgtgtttga atttgtgtct cgaatccgta atcagcgccc
1141 tcagatggtt caaacggata tgcagtacac gttcatctac caagccttac tcgagtacta
1201 cctctacggg gacacagagc tggacgtgtc ctccctggag aagcacctgc agaccatgca
1261 cggcaccacc acccacttcg acaagatcgg gctggaggag gagttcagga aattgacaaa
1321 tgtccggatc atgaaggaga acatgaggac gggcaacttg ccggcaaaca tgaagaaggc
1381 cagggtcatc cagatcatcc cgtatgactt caaccgagtg atcctttcca tgaaaagggg
1441 tcaagaatac acagactaca tcaacgcatc cttcatagac ggctaccgac agaaggacta
1501 tttcatcgcc acccaggggc cactggcaca cacggttgag gacttctgga ggatgatctg
1561 ggaatggaaa tcccacacta tcgtgatgct gacggaggtg caggagagag agcaggataa
1621 atgctaccag tattggccaa ccgagggctc agttactcat ggagaaataa cgattgagat
1681 aaagaatgat accctttcag aagccatcag tatacgagac tttctggtca ctctcaatca
1741 gccccaggcc cgccaggagg agcaggtccg agtagtgcgc cagtttcact tccacggctg
1801 gcctgagatc gggattcccg ccgagggcaa aggcatgatt gacctcatcg cagccgtgca
1861 gaagcagcag cagcagacag gcaaccaccc catcaccgtg cactgcagga acagtatgaa
1921 ttctgctaca aagtggtaca agattttatt gatatatttt ctgattatgc taatttcaaa
1981 tgaagattcc tgccttaaaa tattttttaa tttaatggaa caaaggagaa gccactttcc
2041 ccaggacgca ggactctacc ctccactgtc cgggacagcg ttcgcccttt agcggggagg
2101 tcattacagc ctcatggcct ctaccaaggc cccagatcac aggatctcct gggccttgga
2161 gcacctcacg ctgggggaat caatccctg
//