LOCUS AK300544 1005 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ57088 complete cds, highly similar to Homo
sapiens pre-B-cell leukemia transcription factor interacting
protein 1 (PBXIP1), mRNA.
ACCESSION AK300544
VERSION AK300544.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1005)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1005
/clone="PROST2015014"
/clone_lib="PROST2"
/db_xref="H-InvDB:HIT000495168"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="prostate"
CDS 96..539
/codon_start=1
/note="highly similar to Homo sapiens pre-B-cell leukemia
transcription factor interacting protein 1 (PBXIP1), mRNA"
/protein_id="BAG62252.1"
/transl_table=1
/translation="MASCPDSDNSWVLAGSESLPVETLGPASRMDPESERALQAPHSP
SKTDGKELAGTMDGEGTLFQTESPQSGSILTEETEVKGTLEGDVCGVEPPGPGDTVVQ
GDLQETTVVTGLGPDTQDLEGQSPPQSLPSTPKATGPEGTPKEKW"
BASE COUNT 246 a 278 c 309 g 172 t
ORIGIN
1 gcaaacaaag ggaagcctgc aacaagttaa gctgaagacc gaagcaagag ctggttcagg
61 tggcagccac agcagcctca gggacctcag caactatggc ctcctgccca gactctgata
121 atagctgggt gcttgctggc tccgagagcc tgccagtgga gacactgggc ccggcatcca
181 ggatggaccc agaatctgag agagccctgc aggcccctca cagcccctcc aagacagatg
241 ggaaagaatt agctgggacc atggatggag aagggacgct cttccagact gaaagccctc
301 agtctggcag cattctaaca gaggagactg aggtcaaggg caccctggaa ggtgatgttt
361 gtggtgtgga gcctcctggc ccaggagaca cagtagtcca gggagacctg caggagacca
421 ccgtggtgac aggcctggga ccagacacac aggacctgga aggccagagc cctccacaga
481 gcctgccttc aacccccaaa gcgacagggc ccgaaggaac ccccaaggaa aagtggtagc
541 ttccactcct ctggagaaaa gcagaagcaa cctcggtgga gggaagggac taaggacagc
601 catgaccccc tgccatcctg ggcagagctg ttgaggccca agtaccgggc accccagggc
661 tgctcaggtg tggacgagtg tgcccggcag gagggcctga ctttctttgg cacagagcta
721 gccccagtgc ggcaacagga gctggcctct ctgctaagaa catacttggc acggctgccc
781 tgggctgggc agctgaccaa ggagctaccc ctctcacctg ctttctttgg tgaggatggc
841 atcttccgtc atgaccgcct ccgcttccgg gattttgtgg atgccctgga ggacagcttg
901 gaggaggtgg ctgtgcaaca gacaggtgat gatgatgaag tagatgactt tgaggacttc
961 atcttcagcc acttctttgg agacaaagca ctgaagaaga ggtca
//