LOCUS AK300525 2057 bp mRNA linear HUM 31-JUL-2008
DEFINITION Homo sapiens cDNA FLJ61408 complete cds, highly similar to U3
small nucleolar RNA-associated protein 15 homolog.
ACCESSION AK300525
VERSION AK300525.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2057)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..2057
/clone="PROST2012202"
/clone_lib="PROST2"
/db_xref="H-InvDB:HIT000495149"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="prostate"
CDS 651..1637
/codon_start=1
/note="highly similar to U3 small nucleolar
RNA-associated protein 15 homolog"
/protein_id="BAG62237.1"
/transl_table=1
/translation="MFDARTSESVLSVEHGQPVESVLLFPSGGLLVSAGGRYVKVWDM
LKGGQLLVSLKNHHKTVTCLCLSSSGQRLLSGSLDRKVKVYSTTSYKVVHSFDYAASI
LSLALAHEDETIVVGMTNGILSVKHRKSEAKKESLPRRRRPAYRTFIKGKNYMKQRDD
ILINRPAKKHLELYDRDLKHFRISKALDRVLDPTCTIKTPEITVSIIKELNRRGVLAN
ALAGRDEKEISHVLNFLIRNLSQPRFAPVLINAAEIIIDIYLPVIGQSPVVDKKFLLL
QGLVEKEIDYQRELLETLGMMDMLFATMRRKEGTSVLEHTSDGFPENKKIES"
BASE COUNT 616 a 368 c 477 g 596 t
ORIGIN
1 acgtcatctt cgcgcgacgt tcggttcgct gtgtgtgtcg ccggctcctt gagggtccat
61 gtgattttta cgccagtgct gctgagctgt gcagggtagg gagctggcac agtccgatta
121 attgtccttg ggtcgaggtg tctcgtcgga ccctttgggg ctcagtggag acccctgttc
181 agattaagga atttggtgca gtttcaaaag tagacttttc tcctcagcct ccatataatt
241 atgctgtcac agcttcctca agaattcaca tttatggccg atactcccaa gaacctataa
301 aaaccttttc tcgatttaaa gacacagcat actgtgctac ttttcgacaa gatggtagat
361 tgcttgtggc tggcagtgaa gatggtggag ttcaactttt tgatataagt gggagggctc
421 ccctcaggca gtttgaaggc catacaaaag cagttcatac agtagatttt acagctgaca
481 aatatcacgt ggtctctggg gctgatgatt atacagttaa attatgggat attccaaact
541 ccaaagaaat tttgacattt aaagaacact ctgattatgt gaggtgtgga tgtgctagca
601 aacttaatcc ggatctcttt ataacaggat catatgatca tactgtgaag atgtttgatg
661 cacgaacgag tgagagtgtt ctctccgttg agcatgggca gccagtggag agtgtcctac
721 ttttcccctc tggaggtctt ctggtgtcag caggaggtcg ttatgttaaa gtctgggaca
781 tgttaaaagg aggacaattg ctagtatctt tgaaaaatca tcacaaaacc gtgacatgtt
841 tatgtctaag cagctctgga cagaggttac tctctggctc actggatagg aaggtgaaag
901 tatacagcac aacttcctac aaagtagtcc acagttttga ttatgcagct tcaattttga
961 gtcttgccct tgcacatgaa gatgagacaa tagttgtagg aatgaccaat ggaatactga
1021 gtgttaaaca tcggaaatct gaagcaaaga aggaatcact tcccagaaga agaaggcctg
1081 catatcgaac ctttattaaa ggaaaaaatt acatgaagca acgggatgac attttgatta
1141 acaggccagc aaagaagcac ctagaattgt atgacaggga tctgaaacat tttcggatct
1201 ctaaggcact cgatagagtt cttgatccca cttgtacaat aaagacaccc gagattacgg
1261 tgtccatcat aaaggagtta aatcgaagag gagtccttgc aaatgcgctt gcaggtcggg
1321 atgagaagga aatcagtcat gttcttaatt ttttgataag gaatctttct cagccaagat
1381 ttgcccctgt tttaatcaat gctgctgaaa taattattga tatatatctg cctgtaattg
1441 gtcagtcccc tgtagttgat aaaaagtttt tactacttca aggacttgta gaaaaagaga
1501 ttgattacca aagagaattg ttagaaacct tggggatgat ggatatgctt tttgccacca
1561 tgagaaggaa ggaaggcact tctgtgttgg aacacacatc tgatggattt ccagagaata
1621 agaagataga atcatagtgt ctgctaaata agacatataa gaactctgaa gttggaatag
1681 atttgactgt attaaatgtt ggcgagagac tctctttgat acattaaaaa aactgtttgc
1741 agaagcagtt ctgtggaaga gactggaata attatggccg gaaaacaagt acccgtttta
1801 agtaagacat ggttttccat gtaatatttt gaattatagc atcttcacct agaagatctc
1861 aattgtctta gtcacagagt aggtttatct gggatggata ttaattttaa tacaggagtg
1921 ttctgtatca acatttgggt tggtattcag atgggaattc aaatatgaat cctctctgga
1981 gagggtccaa ctgggaatcc tgctaaagga gcaaagcctt gtattacctc tggaagacaa
2041 caaaaacaat tggcaac
//