LOCUS AK300518 1748 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ55304 complete cds, highly similar to
Fascin-3.
ACCESSION AK300518
VERSION AK300518.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1748)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1748
/clone="PROST2011144"
/clone_lib="PROST2"
/db_xref="H-InvDB:HIT000495142"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="prostate"
CDS 666..1721
/codon_start=1
/note="highly similar to Fascin-3"
/protein_id="BAG62230.1"
/transl_table=1
/translation="MWTPRPALHVHVILYSPIHRCYARADPTMGRIWVDAAVPCLEEC
GFLLHFRDGCYHLETSTHHFLSHVDRLFSQPSSQTAFHMQVRPGGLVALCDGEGGMLY
PQGTHLLLGMGCNPMRGEEWFILQHCPTWVSLRSKTGRFISVIYDGEVRAASERLNRM
SLFQFECDSESPTVQLRSANGYYLSQRRHRAVMADGHPLESDTFFRMHWNCGRIILQS
CRGRFLGIAPNSLLMANVILPGPNEEFGILFANRSFLVLRGRYGYVGSSSGHDLIQCN
QDQPDRIHLLPCRPGIYHFQGGILLVNNILWHLSPLGQVCPQLLYRASGEQLTHCTGP
QWLLHASRPKWHPVGRQ"
BASE COUNT 364 a 495 c 487 g 402 t
ORIGIN
1 gctgggcccc aggccagcct ctgcctggga agttctctct gggaacatct ggtgggtact
61 acaggcccta ttccaggccc tatggcctgt ggaacctcac cacggggggg agggctgggc
121 cagacggaga catcacctgt ggtgtcagcc ccatggatga gacagagtgg atacacagac
181 atcccaaggc tgaggaccta agggttgggc tcatcagctg ggcaggaacc tacctcacct
241 ttgaggcatg caagaataca gtcactgcaa ctgcgaagag tttgggcagg agacagggcc
301 tgcctataag agcttttgct tctgtcttgc catgctggaa ggcaaccttt ggggatggag
361 gtattggcta agtgtgctct ctgcggacaa cagtgaggaa gaaaaaaacc tgggagatct
421 tggtgagcaa tgagcatgag acacaggccg tggtgcgact aaagagcgtg cagggcctct
481 acctgctgtg tgagtgtgat ggcaccgtgt gttatggccg cccaaggacc agccaccatg
541 ggtgctttct actgcgtttc caccggaaca gcaagtggac cctccagtgc ctaatctctg
601 gtcgttattt ggagtccaat ggcaaggacg tgttttgcac ttcccacgtc ctctcagctt
661 accacatgtg gaccccccga ccagccctcc atgtccacgt gatcctctac agccccatcc
721 accgctgcta tgcccgggct gaccccacta tgggccgcat ctgggtggac gcagcagttc
781 cctgcctgga ggagtgtggc ttcctgttgc atttccgaga tggatgctac cacctggaga
841 cctctacaca ccacttcttg tcccatgtag accggctgtt ctcccaaccc tcatcacaga
901 cagcttttca catgcaagtg cggcctggag ggcttgtggc actgtgtgat ggagaaggag
961 gcatgttata tccacagggc acgcatctgc tcttgggcat gggctgcaac cccatgaggg
1021 gtgaggagtg gttcatccta cagcactgcc caacctgggt cagcctcagg tcaaagactg
1081 ggcggttcat ctcagtcatc tacgatggtg aggtgcgtgc tgcttctgag cgcttaaacc
1141 gaatgtcctt gttccagttt gaatgtgaca gtgagagccc cactgtgcag cttcgttcag
1201 ccaatggcta ctacctatcc cagaggcgcc acagggcagt aatggctgat gggcaccccc
1261 tggagtctga cacgttcttc cgaatgcact ggaactgtgg caggatcatc ctgcagtcct
1321 gcagggggcg cttcctgggc attgcaccca acagcctgct gatggccaat gtcatccttc
1381 caggcccaaa tgaggaattt gggattttat ttgccaatcg ctccttcctt gtattgcgag
1441 gtcgttatgg ctatgtgggc tcctcatcgg gccatgacct catacagtgc aaccaggatc
1501 agcccgaccg cattcatcta ctaccctgcc gaccgggtat ctaccacttc caggggggga
1561 tccttctggt caataacatc ctttggcacc tttcgccctt ggggcaagtt tgccctcaac
1621 ttctgtatcg agcttcaggg gagcaactta ctcactgtac tggcccccaa tggcttctac
1681 atgcgagccg accaaagtgg caccctgttg gcagacagtg aagacattac cagagagtgt
1741 atctggga
//