LOCUS AK300480 1354 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ50219 complete cds, highly similar to Homo
sapiens platelet derived growth factor C (PDGFC), mRNA.
ACCESSION AK300480
VERSION AK300480.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1354)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1354
/clone="PROST2000833"
/clone_lib="PROST2"
/db_xref="H-InvDB:HIT000495104"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="prostate"
CDS 467..1015
/codon_start=1
/note="highly similar to Homo sapiens platelet derived
growth factor C (PDGFC), mRNA"
/protein_id="BAG62196.1"
/transl_table=1
/translation="MPQFTEAVSPSVLPPSALPLDLLNNAITAFSTLEDLIRYLEPER
WQLDLEDLYRPTWQLLGKAFVFGRKSRVVDLNLLTEEVRLYSCTPRNFSVSIREELKR
TDTIFWPGCLLVKRCGGNCACCLHNCNECQCVPSKVTKKYHEVLQLRPKTGVRGLHKS
LTDVALEHHEECDCVCRGSTGG"
BASE COUNT 365 a 302 c 332 g 355 t
ORIGIN
1 aggaaaaagt tttggatggg attatgtgga aactaccctg cgattctctg ctgccagagc
61 aggctcggcg cttccacccc agtgcagcct tcccctggcg gtggtgaaag agactcggga
121 gtcgctgctt ccaaagtgcc cgccgttagt gagctctcac cccagtcagc caaatgagcc
181 tcttcgggct tctcctgctg acatctgccc tggccggcca gagacagggg actcaggcgg
241 aatccaacct gagtagtaaa ttccagtttt ccagcaacaa ggaacagaac ggtatgattt
301 tgtagaagtt gaggaaccca gtgatggaac tatattaggg cgctggtgtg gttctggtac
361 tgtaccagga aaacagattt ctaaaggaaa tcaaattagg ataagatttg tatctgatga
421 atattttcct tctgaaccag ggttctgcat ccactacaac attgtcatgc cacaattcac
481 agaagctgtg agtccttcag tgctaccccc ttcagctttg ccactggacc tgcttaataa
541 tgctataact gcctttagta ccttggaaga ccttattcga tatcttgaac cagagagatg
601 gcagttggac ttagaagatc tatataggcc aacttggcaa cttcttggca aggcttttgt
661 ttttggaaga aaatccagag tggtggatct gaaccttcta acagaggagg tgagattata
721 cagctgcaca cctcgtaact tctcagtgtc cataagggaa gaactaaaga gaaccgatac
781 cattttctgg ccaggttgtc tcctggttaa acgctgtggt gggaactgtg cctgttgtct
841 ccacaattgc aatgaatgtc aatgtgtccc aagcaaagtt actaaaaaat accacgaggt
901 ccttcagttg agaccaaaga ccggtgtcag gggattgcac aaatcactca ccgacgtggc
961 cctggagcac catgaggagt gtgactgtgt gtgcagaggg agcacaggag gatagccgca
1021 tcaccaccag cagctcttgc ccagagctgt gcagtgcagt ggctgattct attagagaac
1081 gtatgcgtta tctccatcct taatctcagt tgtttgcttc aaggaccttt catcttcagg
1141 atttacagtg cattctgaaa gaggagacat caaacagaat taggagttgt gcaacagctc
1201 ttttgagagg aggcctaaag gacaggagaa aaggtcttca atcgtggaaa gaaaattaaa
1261 tgttgtatta aatagatcac cagctagttt cagagttacc atgtacgtat tccactagct
1321 gggttctgta tttcagttct ttcgatacgg ctta
//