LOCUS AK300454 1317 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ54060 complete cds, highly similar to
Apolipoprotein-L1 precursor.
ACCESSION AK300454
VERSION AK300454.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1317)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1317
/clone="PLACE7017255"
/clone_lib="PLACE7"
/db_xref="H-InvDB:HIT000495078"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="placenta"
CDS 138..1280
/codon_start=1
/note="highly similar to Apolipoprotein-L1 precursor"
/protein_id="BAG62174.1"
/transl_table=1
/translation="MEGAALLRVSVLCIWVQQNVPSGTDTGDPQSKPLGDWAAGTMDP
ESSIFIEDAIKYFKEKVSTQNLLLLLTDNEAWNGFVAAAELPRNEADELRKALDNLAR
QMIMKDKNWHDKGQQYRNWFLKEFPRLKSKLEDNIRRLRALADGVQKVHKGTTIANVV
SGSLSISSGILTLVGMGLAPFTEGGSLVLLEPGMELGITAALTGITSSTIDYGKKWWT
QAQAHDLVIKSLDKLKEVKEFLGENISNFLSLAGNTYQLTRGIGKDIRALRRARANLQ
SVPHASASRPRVTEPISAESGEQVERVNEPSILEMSRGVKLTDVAPVSFFLVLDVVYL
VYESKHLHEGAKSETAEELKKVAQELEEKLNILNNNYKILQADQEL"
BASE COUNT 362 a 313 c 365 g 277 t
ORIGIN
1 atatcttggg gactggagga cctgtctggt tattatacag acgcataact ggaggtggga
61 tccacacagc tcagaacagc tggatcttgc tcagtctctg ccaggggaag attccttgga
121 ggaggccctg cagcgacatg gagggagctg ctttgctgag agtctctgtc ctctgcatct
181 gggtgcaaca aaacgttcca agtgggacag atactggaga tcctcaaagt aagcccctcg
241 gtgactgggc tgctggcacc atggacccag agagcagtat ctttattgag gatgccatta
301 agtatttcaa ggaaaaagtg agcacacaga atctgctact cctgctgact gataatgagg
361 cctggaacgg attcgtggct gctgctgaac tgcccaggaa tgaggcagat gagctccgta
421 aagctctgga caaccttgca agacaaatga tcatgaaaga caaaaactgg cacgataaag
481 gccagcagta cagaaactgg tttctgaaag agtttcctcg gttgaaaagt aagcttgagg
541 ataacataag aaggctccgt gcccttgcag atggggttca gaaggtccac aaaggcacca
601 ccatcgccaa tgtggtgtct ggctctctca gcatttcctc tggcatcctg accctcgtcg
661 gcatgggtct ggcacccttc acagagggag gcagccttgt actcttggaa cctgggatgg
721 agttgggaat cacagcagct ttgaccggga ttaccagcag taccatagac tacggaaaga
781 agtggtggac acaagcccaa gcccacgacc tggtcatcaa aagccttgac aaattgaagg
841 aggtgaagga gtttttgggt gagaacatat ccaactttct ttccttagct ggcaatactt
901 accaactcac acgaggcatt gggaaggaca tccgtgccct cagacgagcc agagccaatc
961 ttcagtcagt accgcatgcc tcagcctcac gcccccgggt cactgagcca atctcagctg
1021 aaagcggtga acaggtggag agagttaatg aacccagcat cctggaaatg agcagaggag
1081 tcaagctcac ggatgtggcc cctgtaagct tctttcttgt gctggatgta gtctacctcg
1141 tgtacgaatc aaagcactta catgaggggg caaagtcaga gacagctgag gagctgaaga
1201 aggtggctca ggagctggag gagaagctaa acattctcaa caataattat aagattctgc
1261 aggcggacca agaactgtga ccacagggca gggcagccac caggagagat atgcctg
//