LOCUS AK300387 1215 bp mRNA linear HUM 31-JUL-2008
DEFINITION Homo sapiens cDNA FLJ60890 complete cds, moderately similar to
HECT domain and RCC1-like domain-containing protein 2.
ACCESSION AK300387
VERSION AK300387.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1215)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1215
/clone="PLACE7011193"
/clone_lib="PLACE7"
/db_xref="H-InvDB:HIT000495011"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="placenta"
CDS 643..1059
/codon_start=1
/note="moderately similar to HECT domain and RCC1-like
domain-containing protein 2"
/protein_id="BAG62121.1"
/transl_table=1
/translation="MGVSNQGCSRNARHQKARSMPLQDQHLALAILLELAVQRGTLSQ
MLSAILLLLQLWDSRAQETDNERSAQGTSTLLLSLLQTFQSIICSKDTPPSEGNMHLL
SGPLSPSESFLRYLTLHKTTSLPLICNKRRLLSWPI"
BASE COUNT 290 a 309 c 334 g 282 t
ORIGIN
1 gggtagcgag aggcgtcggg atcgcgggcg ccggctgagc cagcggctgc tgggaggctg
61 tgtgcgcacg cctgcggggc gaggaggccg ggccctgcgc ctcaggcctg agaactggga
121 ggaagctgga gaaaagatgc cctctgaata tttgtgtttg gctgcccagg ctcgccttga
181 ctccaaatgg ttgaaaacag atatacagat ggagtcttgc tctgttgccc aggctagagt
241 gcagtggtgc catctcggct taccgcaagc tccgcctccc gggttcacgc cattgtcctg
301 cctcagcgtc ccgagtacct ggaactatag gtgtccacca tcatacctgg ccaatttttt
361 gtattttcag tagagacggg gtttcactgt gtcagccaag atggtctcca tcttctgacc
421 tcgtgatcca ccggccttgg cctcttagag tgctgggatt acaggcataa gccaccactc
481 ccggccgata tattggtttg tttatgaaaa ttatactgga tctgttacag atgatagtgt
541 caaaccaagt ggaacaaaga aagaagatct ggatgacaaa gagaaaaaag atgaaactcc
601 tgcacctgta tatagggcca agtcaattct ggagagctgg gtatgggagt aagcaaccag
661 ggatgttcac ggaacgccag acaccaaaag gccagaagca tgcccctgca ggaccagcac
721 ttggctctgg ccatcctgct ggagctggct gtgcagagag gcacgctgag ccaaatgttg
781 tctgccatcc tgttgttgct tcagctgtgg gacagcaggg cacaggaaac tgacaatgag
841 cgttctgccc agggcaccag caccttgctt ttgtccttgc tgcaaacgtt ccagagcatc
901 atttgcagta aggatacgcc cccctccgag ggcaacatgc accttttgtc tggccctctg
961 agccccagtg agagtttcct gaggtacctc accctccaca agacaacgag cttgccattg
1021 atctgcaaca aacggcggtt gttgtcatgg cccatttaga agatctggct acaccctgta
1081 gatgcctctg ccgtgtagct gtccgacgtc tcataagaga gtcatttttt acagttcaga
1141 actgtagaaa taatgaggaa gtgacactta tatgcaaagc tgatttggag aaccataata
1201 aagatggagg cttct
//