LOCUS AK300376 3512 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ57801 partial cds, highly similar to Homo
sapiens AHNAK nucleoprotein (desmoyokin) (AHNAK), transcript
variant 1, mRNA.
ACCESSION AK300376
VERSION AK300376.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3512)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..3512
/clone="PLACE7009810"
/clone_lib="PLACE7"
/db_xref="H-InvDB:HIT000495000"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="placenta"
CDS 276..>3512
/codon_start=1
/note="highly similar to Homo sapiens AHNAK nucleoprotein
(desmoyokin) (AHNAK), transcript variant 1, mRNA"
/protein_id="BAG62112.1"
/transl_table=1
/translation="MEKEETTRELLLPNWQGSGSHGLTIAQRDDGVFVQEVTQNSPAA
RTGVVKEGDQIVGATIYFDNLQSGEVTQLLNTMGHHTVGLKLHRKGDRSPEPGQTWTR
EVFSSCSSEVVLSGDDEEYQRIYTTKIKPRLKSEDGVEGDLGETQSRTITVTRRVTAY
TVDVTGREGAKDIDISSPEFKIKIPRHELTEISNVDVDTQSGKTVIRLPSGSGAASPT
GSAVDIRAGAISASGPELQGAGHSKLQVTMPGIKVGGSGVNVNAKGLDLGGRGGVQVP
AVDISSSLGGRAVEVQGPSLESGDHGKIKFPTMKVPKFGVSTGREGQTPKAGLRVSAP
EVSVGHKGGKPGLTIQAPQLEVSVPSANIEGLEGKLKGPQITGPSLEGDLGLKGAKPQ
GHIGVDASAPQIGGSITGPSVEVQAPDIDVQGPGSKLNVPKMKVPKFSVSGAKGEETG
IDVTLPTGEVTVPGVSGDVSLPEIATGGLEGKMKGTKVKTPEMIIQKPKISMQDVDLS
LGSPKLKGDIKVSAPGVQGDVKGPQVALKGSRVDIETPNLEGTLTGPRLGSPSGKTGT
CRISMSEVDLNVAAPKVKGGVDVTLPRVEGKVKVPEVDVRGPKVDVSAPDVEAHGPEW
NLKMPKMKMPTFSTPGAKGEGPDVHMTLPKGDISISGPKVNVEAPDVNLEGLGGKLKG
PDVKLPDMSVKTPKISMPDVDLHVKGTKVKGEYDVTVPKLEGELKGPKVDIDAPDVDV
HGPDWHLKMPKMKMPKFSVPGFKAEGPEVDVNLPKADVDISGPKIDVTAPDVSIEEPE
GKLKGPKFKMPEMNIKVPKISMPDVDLHLKGPNVKGEYDVTMPKVESEIKVPDVELKS
AKMDIDVPDVEVQGPDWHLKMPKMKMPKFSMPGFKAEGPEVDVNLPKADVDISGPKVG
VEVPDVNIEGPEGKLKGPKFKMPEMNIKAPKISMPDVDLHMKGPKVKGEYDMTVPKLE
GDLKGPKVDVSAPDVEMQGPDWNLKMPKIKMPKFSMPSLKGEGPEFDVNLSKANVDIS
APKVDTNAPDLSLEGPEGKLKGPKFKMPEMHFRAPKMSLPDVDLDLKGP"
BASE COUNT 941 a 832 c 1062 g 677 t
ORIGIN
1 acaagagccg cctccgcgca cgggggcccg gccactcgga gctgctctgc cgcggggact
61 gcaccgcccg ccctgccaga cccgcccgga acggggctcg tcgccgccag tagccgcagc
121 accgcagcct tgggcctcgc gccggctatg gccgtgccct ggggctgagc cctcaggttg
181 tgaccgagat tcccgacgag agagactgag gggaagagag gaaggagggg cgggctcctg
241 gcaaggcatt cgctcctgag cggaatcctg caaagatgga gaaggaggag acaacccggg
301 agctgctgct gcccaactgg cagggtagtg gctcccacgg gctgaccatc gcccagaggg
361 acgacggcgt ctttgtgcag gaggtgacgc agaactcccc tgcggcccgc actggggtgg
421 tcaaggaggg ggaccagatt gtgggtgcca ccatctactt tgacaacctg cagtcgggtg
481 aggtgaccca gctgctgaac accatggggc accacacggt gggcctgaag ctgcaccgca
541 agggggaccg ctctcccgag cctggccaga cctggacccg tgaagtcttc agctcctgca
601 gctctgaagt ggttctgagc ggggatgatg aggagtacca gcgcatctac accacgaaga
661 tcaagccacg gctgaagtcg gaagatggag tggaaggaga cctcggggag acccagagcc
721 gtaccatcac agtgaccaga agggtcacgg cctacactgt ggatgtgact ggccgggaag
781 gagccaagga catagacatc agtagccctg aattcaagat caagattcca agacatgaac
841 tgactgaaat ctccaatgtg gatgtggata cccagtctgg gaagaccgtg atcagactgc
901 cctcgggctc gggggcagcc tctccgacag gctctgctgt ggatatccga gcaggggcca
961 tttctgcttc aggaccagag ctccaaggtg ctggccactc gaagctccag gtcaccatgc
1021 ctgggataaa ggtgggaggc tcaggtgtca atgtcaatgc aaagggcttg gacttgggtg
1081 gcagaggagg ggtccaagtt ccagcagtgg acatttcatc ttctcttggg ggtagggcag
1141 tagaggtaca gggcccatct ctggagagtg gtgatcatgg caaaattaaa tttcccacca
1201 tgaaagtgcc gaaatttggt gtctcaacag ggcgtgaggg ccagacacca aaggcagggc
1261 tgagggtttc tgcacctgaa gtctctgtgg ggcacaaggg cggcaagcca ggcttgacta
1321 tccaagcccc tcagctggaa gtcagtgtgc cctctgccaa tattgagggc cttgagggga
1381 agctgaaggg cccccaaatc actgggccat cacttgaggg tgacctaggc ctgaaaggtg
1441 ccaagccaca ggggcacatt ggggtggatg cctctgctcc ccaaattggg ggtagcatca
1501 ctggccccag tgtggaagtt caggcccctg acattgatgt tcaggggcct gggagcaaac
1561 tgaatgtgcc caagatgaaa gtccccaagt tctctgtatc aggtgcaaag ggagaggaaa
1621 ctgggattga tgtgacactg cctacaggtg aagtgactgt tcctggggtc tctggggatg
1681 tcagcctgcc tgagattgct actggtgggc tggaaggaaa gatgaaaggt actaaagtga
1741 agactcctga aatgattatt cagaaaccta aaatctccat gcaggatgtg gatctgagcc
1801 ttgggtctcc taaactgaaa ggagatatta aggtttctgc tcctggggtg caaggtgatg
1861 ttaaaggccc tcaagtggca cttaaaggct ccagagtgga catagagaca ccaaacctag
1921 agggaacctt gacaggccct aggcttggca gtccttccgg gaaaaccgga acctgtagga
1981 tctctatgtc agaagtagac ttaaatgtgg ccgcacctaa agtgaaaggg ggtgtagatg
2041 tcacactccc cagagtagaa gggaaagtca aagtccctga agttgatgtc agaggcccca
2101 aagtggatgt cagtgcccca gatgtcgaag cgcatggccc agaatggaac ctgaaaatgc
2161 ccaagatgaa aatgcccacg ttcagcactc caggagccaa aggggaaggt ccagatgttc
2221 atatgactct acccaaagga gatatcagta tttcagggcc caaggtcaat gtggaagccc
2281 cagatgtcaa cttggagggt ctggggggaa aacttaaagg ccccgatgtt aagctgcctg
2341 atatgagtgt caagacacca aagatctcca tgcctgatgt agatttgcac gtgaaaggta
2401 caaaggtgaa gggagagtat gatgtaactg taccaaagct ggaaggagaa ctcaaaggcc
2461 caaaagtgga cattgatgcc ccagatgtgg atgttcatgg ccccgactgg cacttgaaga
2521 tgcccaagat gaaaatgccc aaattcagtg tgccagggtt caaagcagag ggcccagaag
2581 tggatgtgaa cctgcccaag gctgatgtgg acatttccgg gcccaagata gatgttactg
2641 ctcctgatgt gagcattgag gaaccagaag ggaaattgaa agggcccaag tttaagatgc
2701 ctgagatgaa catcaaagtc cccaagatct ccatgcctga tgtggactta catctgaaag
2761 gccctaacgt aaagggagaa tatgatgtca caatgccaaa ggttgaaagt gagattaaag
2821 ttcctgatgt tgaacttaaa agtgccaaaa tggacattga tgtcccagat gtggaggttc
2881 aaggcccaga ctggcacctg aagatgccca agatgaaaat gcccaagttc agcatgcctg
2941 gcttcaaagc agagggccca gaagtggatg tgaacctgcc caaggctgat gtggacatct
3001 caggacccaa ggtgggtgtt gaagttccag atgtgaatat tgaaggacct gaaggaaagc
3061 tgaagggccc caagttcaag atgccagaga tgaatatcaa ggcccccaag atctccatgc
3121 ctgatgtgga cttgcatatg aaaggtccta aagtaaaggg agaatatgat atgacagtgc
3181 caaagctgga aggggacctg aaaggcccaa aagtagatgt cagtgcccca gatgttgaaa
3241 tgcagggtcc tgactggaac ttgaagatgc caaagattaa aatgcccaaa tttagcatgc
3301 ccagcctcaa aggagagggg ccagaatttg atgtgaacct gtccaaagcg aatgtggaca
3361 tttctgcacc aaaagtagat actaatgctc cagatctgag ccttgaagga cctgaaggga
3421 agttgaaagg cccgaagttt aagatgcctg agatgcactt cagagctcct aagatgtctt
3481 tgccagatgt tgacctggat cttaaaggac cc
//